RNA–Protein interactions for RNA: ENST00000575300.1

TFAP4-205, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 1,326 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-205ENST00000575300 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
TFAP4-205ENST00000575300 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
TFAP4-205ENST00000575300 ABCC9O60706 1549 aa27.52■■■□□ 2
TFAP4-205ENST00000575300 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
TFAP4-205ENST00000575300 NACADO15069 1562 aa26.49■■□□□ 1.83
TFAP4-205ENST00000575300 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
TFAP4-205ENST00000575300 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
TFAP4-205ENST00000575300 MYO15BQ96JP2 1530 aa26.38■■□□□ 1.81
TFAP4-205ENST00000575300 DCAF1Q9Y4B6 1507 aa26.32■■□□□ 1.8
TFAP4-205ENST00000575300 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
TFAP4-205ENST00000575300 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
TFAP4-205ENST00000575300 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
TFAP4-205ENST00000575300 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
TFAP4-205ENST00000575300 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
TFAP4-205ENST00000575300 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
TFAP4-205ENST00000575300 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
TFAP4-205ENST00000575300 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
TFAP4-205ENST00000575300 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
TFAP4-205ENST00000575300 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
TFAP4-205ENST00000575300 BAZ1AQ9NRL2 1556 aaPredicted RBP24.62■■□□□ 1.53
TFAP4-205ENST00000575300 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
TFAP4-205ENST00000575300 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
TFAP4-205ENST00000575300 NCAPD3P42695 1498 aa24.46■■□□□ 1.51
TFAP4-205ENST00000575300 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
TFAP4-205ENST00000575300 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
TFAP4-205ENST00000575300 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
TFAP4-205ENST00000575300 WIZO95785 1651 aa24.27■■□□□ 1.48
TFAP4-205ENST00000575300 BAZ1BQ9UIG0 1483 aaKnown RBP24.27■■□□□ 1.48
TFAP4-205ENST00000575300 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
TFAP4-205ENST00000575300 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
TFAP4-205ENST00000575300 NESP48681 1621 aa23.88■■□□□ 1.41
TFAP4-205ENST00000575300 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
TFAP4-205ENST00000575300 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
TFAP4-205ENST00000575300 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
TFAP4-205ENST00000575300 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
TFAP4-205ENST00000575300 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
TFAP4-205ENST00000575300 CFTRP13569 1480 aa23.64■■□□□ 1.37
TFAP4-205ENST00000575300 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
TFAP4-205ENST00000575300 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.37
TFAP4-205ENST00000575300 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
TFAP4-205ENST00000575300 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
TFAP4-205ENST00000575300 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
TFAP4-205ENST00000575300 CUX2O14529 1486 aa23.45■■□□□ 1.34
TFAP4-205ENST00000575300 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
TFAP4-205ENST00000575300 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
TFAP4-205ENST00000575300 WDR62O43379 1518 aa23.33■■□□□ 1.33
TFAP4-205ENST00000575300 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
TFAP4-205ENST00000575300 DNAJC5Q9H3Z4 198 aa23.27■■□□□ 1.32
TFAP4-205ENST00000575300 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
TFAP4-205ENST00000575300 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
TFAP4-205ENST00000575300 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
TFAP4-205ENST00000575300 CUX1P39880 1505 aa23.02■■□□□ 1.28
TFAP4-205ENST00000575300 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
TFAP4-205ENST00000575300 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
TFAP4-205ENST00000575300 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.26
TFAP4-205ENST00000575300 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.25
TFAP4-205ENST00000575300 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
TFAP4-205ENST00000575300 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
TFAP4-205ENST00000575300 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
TFAP4-205ENST00000575300 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
TFAP4-205ENST00000575300 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
TFAP4-205ENST00000575300 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
TFAP4-205ENST00000575300 SOGA1O94964 1423 aa22.81■■□□□ 1.24
TFAP4-205ENST00000575300 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
TFAP4-205ENST00000575300 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
TFAP4-205ENST00000575300 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.233e-6■■■■□ 19.6
TFAP4-205ENST00000575300 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
TFAP4-205ENST00000575300 ABCA10Q8WWZ4 1543 aa22.68■■□□□ 1.22
TFAP4-205ENST00000575300 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
TFAP4-205ENST00000575300 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
TFAP4-205ENST00000575300 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
TFAP4-205ENST00000575300 PBRM1Q86U86 1689 aa22.53■■□□□ 1.2
TFAP4-205ENST00000575300 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
TFAP4-205ENST00000575300 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
TFAP4-205ENST00000575300 CHD1O14646 1710 aa22.47■■□□□ 1.19
TFAP4-205ENST00000575300 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
TFAP4-205ENST00000575300 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
TFAP4-205ENST00000575300 SYNJ2O15056 1496 aa22.38■■□□□ 1.17
TFAP4-205ENST00000575300 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
TFAP4-205ENST00000575300 FBLN2P98095 1184 aa22.34■■□□□ 1.17
TFAP4-205ENST00000575300 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
TFAP4-205ENST00000575300 KIF27Q86VH2 1401 aa22.33■■□□□ 1.17
TFAP4-205ENST00000575300 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
TFAP4-205ENST00000575300 FHAD1B1AJZ9 1412 aa22.29■■□□□ 1.16
TFAP4-205ENST00000575300 IGF1RP08069 1367 aa22.28■■□□□ 1.16
TFAP4-205ENST00000575300 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
TFAP4-205ENST00000575300 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
TFAP4-205ENST00000575300 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
TFAP4-205ENST00000575300 CUL7Q14999 1698 aa22.19■■□□□ 1.14
TFAP4-205ENST00000575300 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
TFAP4-205ENST00000575300 NUP160Q12769 1436 aa22.18■■□□□ 1.14
TFAP4-205ENST00000575300 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
TFAP4-205ENST00000575300 ARHGEF11O15085 1522 aa22.12■■□□□ 1.13
TFAP4-205ENST00000575300 RIMBP3CA6NJZ7 1639 aa22.12■■□□□ 1.13
TFAP4-205ENST00000575300 RIMBP3BA6NNM3 1639 aa22.12■■□□□ 1.13
TFAP4-205ENST00000575300 RIMBP3Q9UFD9 1639 aa22.12■■□□□ 1.13
TFAP4-205ENST00000575300 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
TFAP4-205ENST00000575300 SHROOM2Q13796 1616 aa22.02■■□□□ 1.11
TFAP4-205ENST00000575300 RAPGEF2Q9Y4G8 1499 aa22■■□□□ 1.11
TFAP4-205ENST00000575300 PRXQ9BXM0 1461 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms