Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.097e-7■■□□□ 13.6
PRPF8Q6P2Q9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.26□□□□□ -0.137e-7■■□□□ 13.6
PRPF8Q6P2Q9 PTMS-204ENST00000540667 820 ntTSL 212.46□□□□□ -0.417e-7■■□□□ 13.6
PRPF8Q6P2Q9 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.53□□□□□ -0.725e-7■■□□□ 13.6
PRPF8Q6P2Q9 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.885e-7■■□□□ 13.6
PRPF8Q6P2Q9 GLRX3-205ENST00000496195 317 ntTSL 29.87□□□□□ -0.831e-7■■□□□ 13.6
PRPF8Q6P2Q9 GLRX3-206ENST00000619341 496 ntTSL 27.17□□□□□ -1.261e-7■■□□□ 13.6
PRPF8Q6P2Q9 ANKRD10-209ENST00000489973 745 ntTSL 37.4□□□□□ -1.234e-7■■□□□ 13.6
PRPF8Q6P2Q9 WDR18-206ENST00000590397 1083 ntTSL 515.12■□□□□ 0.013e-10■■□□□ 13.6
PRPF8Q6P2Q9 FREM1-208ENST00000486223 815 ntTSL 32.01□□□□□ -2.096e-7■■□□□ 13.6
PRPF8Q6P2Q9 HGD-204ENST00000475447 565 ntTSL 36.29□□□□□ -1.47e-9■■□□□ 13.6
PRPF8Q6P2Q9 UBE3C-208ENST00000497368 776 ntTSL 24.84□□□□□ -1.642e-6■■□□□ 13.6
PRPF8Q6P2Q9 NHSL1-203ENST00000426841 947 ntTSL 24.21□□□□□ -1.745e-8■■□□□ 13.6
PRPF8Q6P2Q9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.3□□□□□ -0.125e-15■■□□□ 13.6
PRPF8Q6P2Q9 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.95e-15■■□□□ 13.6
PRPF8Q6P2Q9 KAT2B-203ENST00000468111 593 ntTSL 30.88□□□□□ -2.279e-8■■□□□ 13.6
PRPF8Q6P2Q9 HNRNPLL-210ENST00000488099 544 ntTSL 30.46□□□□□ -2.349e-8■■□□□ 13.6
PRPF8Q6P2Q9 FAM193B-205ENST00000506064 399 ntTSL 314.43□□□□□ -0.13e-8■■□□□ 13.6
PRPF8Q6P2Q9 INPP5D-208ENST00000472517 527 ntTSL 36.22□□□□□ -1.417e-9■■□□□ 13.6
PRPF8Q6P2Q9 CYP4F12-216ENST00000550627 2264 ntTSL 210.49□□□□□ -0.733e-7■■□□□ 13.6
PRPF8Q6P2Q9 CYP4F12-206ENST00000546608 3256 ntTSL 26.48□□□□□ -1.373e-7■■□□□ 13.6
PRPF8Q6P2Q9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.414e-9■■□□□ 13.6
PRPF8Q6P2Q9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.95■□□□□ 0.32e-14■■□□□ 13.6
PRPF8Q6P2Q9 RBCK1-205ENST00000400245 1024 ntTSL 315.39■□□□□ 0.052e-14■■□□□ 13.6
PRPF8Q6P2Q9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.76□□□□□ -0.052e-14■■□□□ 13.6
PRPF8Q6P2Q9 ULK1-205ENST00000541761 1262 ntTSL 213.02□□□□□ -0.321e-7■■□□□ 13.6
PRPF8Q6P2Q9 LRRC8D-207ENST00000532201 597 ntTSL 49.87□□□□□ -0.832e-15■■□□□ 13.6
PRPF8Q6P2Q9 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.242e-15■■□□□ 13.6
PRPF8Q6P2Q9 LRRC8D-203ENST00000414841 666 ntTSL 37.07□□□□□ -1.282e-15■■□□□ 13.6
PRPF8Q6P2Q9 SMAD4-211ENST00000590499 545 ntTSL 49.63□□□□□ -0.872e-7■■□□□ 13.6
PRPF8Q6P2Q9 SMAD4-216ENST00000593223 568 ntTSL 33.27□□□□□ -1.892e-7■■□□□ 13.6
PRPF8Q6P2Q9 IPO7-208ENST00000630083 195 ntTSL 5 BASIC10.22□□□□□ -0.772e-6■■□□□ 13.6
PRPF8Q6P2Q9 FGFR4-210ENST00000508139 720 ntTSL 515.52■□□□□ 0.075e-12■■□□□ 13.6
PRPF8Q6P2Q9 SP3-202ENST00000416195 3627 ntAPPRIS ALT2 TSL 1 (best)10.04□□□□□ -0.81e-7■■□□□ 13.6
PRPF8Q6P2Q9 ACY1-226ENST00000637746 685 ntTSL 213.3□□□□□ -0.288e-9■■□□□ 13.6
PRPF8Q6P2Q9 ACY1-219ENST00000637102 1488 ntTSL 311.91□□□□□ -0.58e-9■■□□□ 13.6
PRPF8Q6P2Q9 ACY1-220ENST00000637149 386 ntTSL 310.66□□□□□ -0.78e-9■■□□□ 13.6
PRPF8Q6P2Q9 ACADVL-213ENST00000578579 458 ntTSL 34.37□□□□□ -1.714e-12■■□□□ 13.6
PRPF8Q6P2Q9 UBTF-214ENST00000537550 1085 ntTSL 220.15■□□□□ 0.829e-7■■□□□ 13.6
PRPF8Q6P2Q9 CLN6-212ENST00000636020 894 ntTSL 216.61■□□□□ 0.252e-6■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-220ENST00000528077 1557 ntTSL 216.33■□□□□ 0.22e-6■■□□□ 13.6
PRPF8Q6P2Q9 MAPK7-214ENST00000573417 418 ntTSL 515.52■□□□□ 0.085e-6■■□□□ 13.6
PRPF8Q6P2Q9 CLN6-205ENST00000564846 1762 ntTSL 215.46■□□□□ 0.072e-6■■□□□ 13.6
PRPF8Q6P2Q9 ARL1-208ENST00000551092 731 ntTSL 512.58□□□□□ -0.42e-7■■□□□ 13.6
PRPF8Q6P2Q9 ENTPD6-218ENST00000490187 1918 ntTSL 212.42□□□□□ -0.421e-11■■□□□ 13.6
PRPF8Q6P2Q9 PRKAR1B-210ENST00000488474 617 ntTSL 312.11□□□□□ -0.474e-8■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC11.98□□□□□ -0.491e-11■■□□□ 13.6
PRPF8Q6P2Q9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.589e-9■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-224ENST00000531355 1121 ntTSL 1 (best)11.07□□□□□ -0.642e-6■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.642e-6■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.02□□□□□ -0.652e-6■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-225ENST00000531769 567 ntTSL 410.59□□□□□ -0.712e-6■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC10.43□□□□□ -0.741e-11■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC10.41□□□□□ -0.742e-6■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-219ENST00000526513 682 ntTSL 510.15□□□□□ -0.782e-6■■□□□ 13.6
PRPF8Q6P2Q9 ARL1-209ENST00000551671 879 ntTSL 2 BASIC9.89□□□□□ -0.832e-7■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.832e-6■■□□□ 13.6
PRPF8Q6P2Q9 ERO1A-205ENST00000555069 846 ntTSL 29.63□□□□□ -0.871e-11■■□□□ 13.6
PRPF8Q6P2Q9 ARL1-210ENST00000551688 470 ntTSL 4 BASIC9.13□□□□□ -0.952e-7■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-212ENST00000444301 666 ntTSL 3 BASIC9.02□□□□□ -0.971e-11■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-215ENST00000496619 738 ntTSL 38.63□□□□□ -1.032e-6■■□□□ 13.6
PRPF8Q6P2Q9 ARL1-205ENST00000549283 566 ntTSL 48.52□□□□□ -1.052e-7■■□□□ 13.6
PRPF8Q6P2Q9 ARL1-206ENST00000549302 725 ntTSL 38.52□□□□□ -1.052e-7■■□□□ 13.6
PRPF8Q6P2Q9 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.132e-7■■□□□ 13.6
PRPF8Q6P2Q9 MKNK1-222ENST00000529170 530 ntTSL 47.49□□□□□ -1.212e-6■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC7.34□□□□□ -1.231e-11■■□□□ 13.6
PRPF8Q6P2Q9 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC7.06□□□□□ -1.282e-7■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.51□□□□□ -1.371e-11■■□□□ 13.6
PRPF8Q6P2Q9 GLOD4-204ENST00000571073 2311 ntTSL 26.47□□□□□ -1.371e-11■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.1□□□□□ -1.591e-11■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.82□□□□□ -1.81e-11■■□□□ 13.6
PRPF8Q6P2Q9 CRYZ-207ENST00000492102 2899 ntTSL 1 (best)2.7□□□□□ -1.985e-6■■□□□ 13.6
PRPF8Q6P2Q9 ERO1A-202ENST00000553714 672 ntTSL 22.16□□□□□ -2.061e-11■■□□□ 13.6
PRPF8Q6P2Q9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.46□□□□□ -2.341e-11■■□□□ 13.6
PRPF8Q6P2Q9 ERO1A-208ENST00000556358 951 ntTSL 20.1□□□□□ -2.391e-11■■□□□ 13.6
PRPF8Q6P2Q9 COPA-207ENST00000545284 879 ntTSL 26.59□□□□□ -1.364e-6■■□□□ 13.6
PRPF8Q6P2Q9 LAMB2-207ENST00000477225 535 ntTSL 211.02□□□□□ -0.643e-7■■□□□ 13.6
PRPF8Q6P2Q9 GALE-205ENST00000445705 792 ntTSL 216.27■□□□□ 0.21e-7■■□□□ 13.6
PRPF8Q6P2Q9 GALE-213ENST00000470949 547 ntTSL 315.56■□□□□ 0.081e-7■■□□□ 13.6
PRPF8Q6P2Q9 HOOK1-202ENST00000455990 519 ntTSL 417.64■□□□□ 0.415e-8■■□□□ 13.6
PRPF8Q6P2Q9 HOOK1-203ENST00000465876 2228 ntTSL 216.36■□□□□ 0.215e-8■■□□□ 13.6
PRPF8Q6P2Q9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -05e-8■■□□□ 13.6
PRPF8Q6P2Q9 TESC-202ENST00000462502 854 ntTSL 518.08■□□□□ 0.484e-7■■□□□ 13.6
PRPF8Q6P2Q9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.2■□□□□ 0.52e-8■■□□□ 13.6
PRPF8Q6P2Q9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.31□□□□□ -0.285e-7■■□□□ 13.6
PRPF8Q6P2Q9 SLC11A2-221ENST00000550329 622 ntTSL 217.33■□□□□ 0.372e-7■■□□□ 13.6
PRPF8Q6P2Q9 SLC11A2-224ENST00000550995 551 ntTSL 43.37□□□□□ -1.872e-7■■□□□ 13.6
PRPF8Q6P2Q9 ACAP3-206ENST00000467278 2725 ntTSL 1 (best)13.14□□□□□ -0.311e-6■■□□□ 13.6
PRPF8Q6P2Q9 B3GNTL1-205ENST00000571394 774 ntTSL 313.44□□□□□ -0.264e-7■■□□□ 13.6
PRPF8Q6P2Q9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.477e-9■■□□□ 13.6
PRPF8Q6P2Q9 ZSWIM8-215ENST00000603195 674 ntTSL 27.12□□□□□ -1.271e-7■■□□□ 13.6
PRPF8Q6P2Q9 PCED1A-205ENST00000474714 531 ntTSL 312.29□□□□□ -0.449e-15■■□□□ 13.6
PRPF8Q6P2Q9 DENND1A-210ENST00000479305 791 ntTSL 29.38□□□□□ -0.913e-6■■□□□ 13.6
PRPF8Q6P2Q9 DENND1A-212ENST00000497135 1207 ntTSL 58.62□□□□□ -1.033e-6■■□□□ 13.6
PRPF8Q6P2Q9 DENND1A-211ENST00000491650 842 ntTSL 58.14□□□□□ -1.113e-6■■□□□ 13.6
PRPF8Q6P2Q9 GID8-202ENST00000497101 326 ntTSL 54.29□□□□□ -1.724e-7■■□□□ 13.6
PRPF8Q6P2Q9 RERE-216ENST00000505225 533 ntTSL 26.27□□□□□ -1.414e-7■■□□□ 13.6
PRPF8Q6P2Q9 SEC31A-214ENST00000505434 569 ntTSL 413.36□□□□□ -0.275e-8■■□□□ 13.6
PRPF8Q6P2Q9 BRD8-221ENST00000489351 553 ntTSL 53.32□□□□□ -1.884e-6■■□□□ 13.6
PRPF8Q6P2Q9 SLC4A2-211ENST00000482697 383 ntTSL 313.52□□□□□ -0.245e-7■■□□□ 13.6
Retrieved 100 of 73,762 protein–RNA pairs in 1559.2 ms