RNA–Protein interactions for RNA: ENST00000426841.6

NHSL1-203, Transcript of NHS like 1, humanhuman

TSL 2

Gene NHSL1, Length 947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHSL1-203ENST00000426841 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
NHSL1-203ENST00000426841 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
NHSL1-203ENST00000426841 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
NHSL1-203ENST00000426841 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
NHSL1-203ENST00000426841 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
NHSL1-203ENST00000426841 FOXD1Q16676 465 aa19.81■□□□□ 0.76
NHSL1-203ENST00000426841 ADRA2BP18089 450 aa19.11■□□□□ 0.65
NHSL1-203ENST00000426841 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
NHSL1-203ENST00000426841 PIAS4Q8N2W9 510 aaPredicted RBP18.73■□□□□ 0.59
NHSL1-203ENST00000426841 MSH5O43196 834 aa18.26■□□□□ 0.51
NHSL1-203ENST00000426841 PPP4R3CPQ6ZMV5 832 aa17.67■□□□□ 0.42
NHSL1-203ENST00000426841 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
NHSL1-203ENST00000426841 KCNA4P22459 653 aa17.34■□□□□ 0.37
NHSL1-203ENST00000426841 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
NHSL1-203ENST00000426841 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
NHSL1-203ENST00000426841 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
NHSL1-203ENST00000426841 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
NHSL1-203ENST00000426841 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
NHSL1-203ENST00000426841 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
NHSL1-203ENST00000426841 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
NHSL1-203ENST00000426841 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
NHSL1-203ENST00000426841 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
NHSL1-203ENST00000426841 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
NHSL1-203ENST00000426841 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
NHSL1-203ENST00000426841 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
NHSL1-203ENST00000426841 SLC4A2P04920 1241 aa16■□□□□ 0.15
NHSL1-203ENST00000426841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■■□□ 17.6
NHSL1-203ENST00000426841 ZBTB22O15209 634 aa15.95■□□□□ 0.14
NHSL1-203ENST00000426841 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
NHSL1-203ENST00000426841 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
NHSL1-203ENST00000426841 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
NHSL1-203ENST00000426841 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
NHSL1-203ENST00000426841 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
NHSL1-203ENST00000426841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
NHSL1-203ENST00000426841 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
NHSL1-203ENST00000426841 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
NHSL1-203ENST00000426841 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
NHSL1-203ENST00000426841 APLP2Q06481 763 aa15.36■□□□□ 0.05
NHSL1-203ENST00000426841 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
NHSL1-203ENST00000426841 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
NHSL1-203ENST00000426841 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
NHSL1-203ENST00000426841 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
NHSL1-203ENST00000426841 CAPN15O75808 1086 aa15.21■□□□□ 0.03
NHSL1-203ENST00000426841 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
NHSL1-203ENST00000426841 ZNF219Q9P2Y4 722 aaPredicted RBP15.14■□□□□ 0.01
NHSL1-203ENST00000426841 ABCB7O75027 752 aa14.93□□□□□ -0.02
NHSL1-203ENST00000426841 DSG3P32926 999 aa14.9□□□□□ -0.02
NHSL1-203ENST00000426841 POLA2Q14181 598 aa14.89□□□□□ -0.03
NHSL1-203ENST00000426841 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
NHSL1-203ENST00000426841 FBLN2P98095 1184 aa14.64□□□□□ -0.07
NHSL1-203ENST00000426841 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
NHSL1-203ENST00000426841 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
NHSL1-203ENST00000426841 FKBP8Q14318 412 aa14.4□□□□□ -0.1
NHSL1-203ENST00000426841 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
NHSL1-203ENST00000426841 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
NHSL1-203ENST00000426841 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
NHSL1-203ENST00000426841 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
NHSL1-203ENST00000426841 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
NHSL1-203ENST00000426841 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
NHSL1-203ENST00000426841 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
NHSL1-203ENST00000426841 PROM2Q8N271 834 aa14.05□□□□□ -0.16
NHSL1-203ENST00000426841 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
NHSL1-203ENST00000426841 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
NHSL1-203ENST00000426841 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
NHSL1-203ENST00000426841 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
NHSL1-203ENST00000426841 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
NHSL1-203ENST00000426841 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
NHSL1-203ENST00000426841 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
NHSL1-203ENST00000426841 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
NHSL1-203ENST00000426841 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
NHSL1-203ENST00000426841 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
NHSL1-203ENST00000426841 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
NHSL1-203ENST00000426841 MIER1Q8N108 512 aa13.58□□□□□ -0.24
NHSL1-203ENST00000426841 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
NHSL1-203ENST00000426841 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
NHSL1-203ENST00000426841 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
NHSL1-203ENST00000426841 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
NHSL1-203ENST00000426841 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
NHSL1-203ENST00000426841 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
NHSL1-203ENST00000426841 KLHL34Q8N239 644 aa13.45□□□□□ -0.26
NHSL1-203ENST00000426841 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
NHSL1-203ENST00000426841 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
NHSL1-203ENST00000426841 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
NHSL1-203ENST00000426841 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
NHSL1-203ENST00000426841 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
NHSL1-203ENST00000426841 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
NHSL1-203ENST00000426841 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
NHSL1-203ENST00000426841 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
NHSL1-203ENST00000426841 NUBP1P53384 320 aa13.2□□□□□ -0.3
NHSL1-203ENST00000426841 POTEHQ6S545 545 aa13.18□□□□□ -0.3
NHSL1-203ENST00000426841 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
NHSL1-203ENST00000426841 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
NHSL1-203ENST00000426841 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
NHSL1-203ENST00000426841 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
NHSL1-203ENST00000426841 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
NHSL1-203ENST00000426841 GSE1Q14687 1217 aa13.09□□□□□ -0.31
NHSL1-203ENST00000426841 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
NHSL1-203ENST00000426841 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
NHSL1-203ENST00000426841 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
NHSL1-203ENST00000426841 PKD2Q13563 968 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms