RNA–Protein interactions for RNA: ENST00000486223.1

FREM1-208, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 3

Gene FREM1, Length 815 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-208ENST00000486223 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
FREM1-208ENST00000486223 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
FREM1-208ENST00000486223 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
FREM1-208ENST00000486223 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
FREM1-208ENST00000486223 FOXD1Q16676 465 aa18.87■□□□□ 0.61
FREM1-208ENST00000486223 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
FREM1-208ENST00000486223 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
FREM1-208ENST00000486223 ADRA2BP18089 450 aa17.7■□□□□ 0.42
FREM1-208ENST00000486223 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
FREM1-208ENST00000486223 MSH5O43196 834 aa17.42■□□□□ 0.38
FREM1-208ENST00000486223 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
FREM1-208ENST00000486223 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
FREM1-208ENST00000486223 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
FREM1-208ENST00000486223 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
FREM1-208ENST00000486223 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
FREM1-208ENST00000486223 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
FREM1-208ENST00000486223 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
FREM1-208ENST00000486223 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
FREM1-208ENST00000486223 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
FREM1-208ENST00000486223 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
FREM1-208ENST00000486223 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
FREM1-208ENST00000486223 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
FREM1-208ENST00000486223 KCNA4P22459 653 aa14.97□□□□□ -0.01
FREM1-208ENST00000486223 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
FREM1-208ENST00000486223 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
FREM1-208ENST00000486223 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
FREM1-208ENST00000486223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.071e-8■■□□□ 11.6
FREM1-208ENST00000486223 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
FREM1-208ENST00000486223 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
FREM1-208ENST00000486223 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
FREM1-208ENST00000486223 DSG3P32926 999 aa14.1□□□□□ -0.15
FREM1-208ENST00000486223 CAPN15O75808 1086 aa14.07□□□□□ -0.16
FREM1-208ENST00000486223 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
FREM1-208ENST00000486223 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
FREM1-208ENST00000486223 ZBTB22O15209 634 aa13.88□□□□□ -0.19
FREM1-208ENST00000486223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
FREM1-208ENST00000486223 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
FREM1-208ENST00000486223 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
FREM1-208ENST00000486223 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
FREM1-208ENST00000486223 ABCB7O75027 752 aa13.84□□□□□ -0.19
FREM1-208ENST00000486223 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
FREM1-208ENST00000486223 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
FREM1-208ENST00000486223 APLP2Q06481 763 aa13.78□□□□□ -0.2
FREM1-208ENST00000486223 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
FREM1-208ENST00000486223 POLA2Q14181 598 aa13.6□□□□□ -0.23
FREM1-208ENST00000486223 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
FREM1-208ENST00000486223 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
FREM1-208ENST00000486223 POTEHQ6S545 545 aa13.26□□□□□ -0.29
FREM1-208ENST00000486223 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
FREM1-208ENST00000486223 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
FREM1-208ENST00000486223 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
FREM1-208ENST00000486223 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
FREM1-208ENST00000486223 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
FREM1-208ENST00000486223 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
FREM1-208ENST00000486223 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
FREM1-208ENST00000486223 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
FREM1-208ENST00000486223 FBLN2P98095 1184 aa12.92□□□□□ -0.34
FREM1-208ENST00000486223 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
FREM1-208ENST00000486223 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
FREM1-208ENST00000486223 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
FREM1-208ENST00000486223 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
FREM1-208ENST00000486223 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
FREM1-208ENST00000486223 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
FREM1-208ENST00000486223 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
FREM1-208ENST00000486223 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
FREM1-208ENST00000486223 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
FREM1-208ENST00000486223 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
FREM1-208ENST00000486223 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
FREM1-208ENST00000486223 EVX2Q03828 476 aa12.54□□□□□ -0.4
FREM1-208ENST00000486223 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
FREM1-208ENST00000486223 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
FREM1-208ENST00000486223 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
FREM1-208ENST00000486223 HAX1O00165 279 aa12.43□□□□□ -0.42
FREM1-208ENST00000486223 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
FREM1-208ENST00000486223 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
FREM1-208ENST00000486223 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
FREM1-208ENST00000486223 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
FREM1-208ENST00000486223 PROM2Q8N271 834 aa12.24□□□□□ -0.45
FREM1-208ENST00000486223 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
FREM1-208ENST00000486223 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
FREM1-208ENST00000486223 GABBR2O75899 941 aa12.12□□□□□ -0.47
FREM1-208ENST00000486223 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
FREM1-208ENST00000486223 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
FREM1-208ENST00000486223 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
FREM1-208ENST00000486223 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
FREM1-208ENST00000486223 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
FREM1-208ENST00000486223 FKBP8Q14318 412 aa11.91□□□□□ -0.5
FREM1-208ENST00000486223 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
FREM1-208ENST00000486223 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
FREM1-208ENST00000486223 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
FREM1-208ENST00000486223 CLCN6P51797 869 aa11.77□□□□□ -0.53
FREM1-208ENST00000486223 MIER1Q8N108 512 aa11.76□□□□□ -0.53
FREM1-208ENST00000486223 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
FREM1-208ENST00000486223 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
FREM1-208ENST00000486223 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
FREM1-208ENST00000486223 LHX8Q68G74 356 aa11.7□□□□□ -0.54
FREM1-208ENST00000486223 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
FREM1-208ENST00000486223 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
FREM1-208ENST00000486223 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
FREM1-208ENST00000486223 NUBP1P53384 320 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms