RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
UBE3C-208ENST00000497368 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
UBE3C-208ENST00000497368 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
UBE3C-208ENST00000497368 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
UBE3C-208ENST00000497368 FOXD1Q16676 465 aa15.93■□□□□ 0.14
UBE3C-208ENST00000497368 PLPPR3Q6T4P5 718 aa15.72■□□□□ 0.11
UBE3C-208ENST00000497368 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
UBE3C-208ENST00000497368 ADRA2BP18089 450 aa15.18■□□□□ 0.02
UBE3C-208ENST00000497368 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
UBE3C-208ENST00000497368 MSH5O43196 834 aa14.71□□□□□ -0.05
UBE3C-208ENST00000497368 POTEDQ86YR6 584 aa14.36□□□□□ -0.11
UBE3C-208ENST00000497368 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
UBE3C-208ENST00000497368 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
UBE3C-208ENST00000497368 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
UBE3C-208ENST00000497368 SCAF1Q9H7N4 1312 aaKnown RBP13.81□□□□□ -0.2
UBE3C-208ENST00000497368 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
UBE3C-208ENST00000497368 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
UBE3C-208ENST00000497368 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
UBE3C-208ENST00000497368 KCNA4P22459 653 aa13.35□□□□□ -0.27
UBE3C-208ENST00000497368 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
UBE3C-208ENST00000497368 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
UBE3C-208ENST00000497368 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
UBE3C-208ENST00000497368 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
UBE3C-208ENST00000497368 CCDC180Q9P1Z9 1646 aa12.83□□□□□ -0.36
UBE3C-208ENST00000497368 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
UBE3C-208ENST00000497368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
UBE3C-208ENST00000497368 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
UBE3C-208ENST00000497368 ABCC9O60706 1549 aa12.63□□□□□ -0.39
UBE3C-208ENST00000497368 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
UBE3C-208ENST00000497368 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
UBE3C-208ENST00000497368 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
UBE3C-208ENST00000497368 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
UBE3C-208ENST00000497368 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
UBE3C-208ENST00000497368 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
UBE3C-208ENST00000497368 ZBTB22O15209 634 aa12.29□□□□□ -0.44
UBE3C-208ENST00000497368 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
UBE3C-208ENST00000497368 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
UBE3C-208ENST00000497368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.16□□□□□ -0.46
UBE3C-208ENST00000497368 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
UBE3C-208ENST00000497368 CAPN15O75808 1086 aa12.13□□□□□ -0.47
UBE3C-208ENST00000497368 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
UBE3C-208ENST00000497368 SAMD1Q6SPF0 538 aaPredicted RBP12.12□□□□□ -0.47
UBE3C-208ENST00000497368 APLP2Q06481 763 aa12.07□□□□□ -0.48
UBE3C-208ENST00000497368 RB1CC1Q8TDY2 1594 aa12.06□□□□□ -0.48
UBE3C-208ENST00000497368 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
UBE3C-208ENST00000497368 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
UBE3C-208ENST00000497368 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
UBE3C-208ENST00000497368 NACADO15069 1562 aa12□□□□□ -0.49
UBE3C-208ENST00000497368 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
UBE3C-208ENST00000497368 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
UBE3C-208ENST00000497368 DSG3P32926 999 aa11.95□□□□□ -0.5
UBE3C-208ENST00000497368 ABCB7O75027 752 aa11.9□□□□□ -0.5
UBE3C-208ENST00000497368 MYO15BQ96JP2 1530 aa11.88□□□□□ -0.51
UBE3C-208ENST00000497368 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
UBE3C-208ENST00000497368 ZCCHC6Q5VYS8 1495 aaKnown RBP11.85□□□□□ -0.51
UBE3C-208ENST00000497368 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
UBE3C-208ENST00000497368 POLA2Q14181 598 aa11.78□□□□□ -0.52
UBE3C-208ENST00000497368 DCAF1Q9Y4B6 1507 aa11.76□□□□□ -0.53
UBE3C-208ENST00000497368 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBE3C-208ENST00000497368 SCRIBQ14160 1630 aa11.64□□□□□ -0.55
UBE3C-208ENST00000497368 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
UBE3C-208ENST00000497368 SHROOM4Q9ULL8 1493 aa11.58□□□□□ -0.56
UBE3C-208ENST00000497368 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
UBE3C-208ENST00000497368 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
UBE3C-208ENST00000497368 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
UBE3C-208ENST00000497368 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
UBE3C-208ENST00000497368 FBLN2P98095 1184 aa11.41□□□□□ -0.58
UBE3C-208ENST00000497368 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
UBE3C-208ENST00000497368 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
UBE3C-208ENST00000497368 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
UBE3C-208ENST00000497368 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
UBE3C-208ENST00000497368 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
UBE3C-208ENST00000497368 SPDYE2Q495Y8 402 aa11.2□□□□□ -0.62
UBE3C-208ENST00000497368 AKT1S1Q96B36 256 aa11.18□□□□□ -0.62
UBE3C-208ENST00000497368 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
UBE3C-208ENST00000497368 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
UBE3C-208ENST00000497368 POTEHQ6S545 545 aa11.11□□□□□ -0.63
UBE3C-208ENST00000497368 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
UBE3C-208ENST00000497368 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
UBE3C-208ENST00000497368 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
UBE3C-208ENST00000497368 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
UBE3C-208ENST00000497368 HMGXB3Q12766 1538 aa11.05□□□□□ -0.64
UBE3C-208ENST00000497368 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
UBE3C-208ENST00000497368 PEG3Q9GZU2 1588 aa11.05□□□□□ -0.64
UBE3C-208ENST00000497368 SMARCA2P51531 1590 aa11□□□□□ -0.65
UBE3C-208ENST00000497368 BAZ1AQ9NRL2 1556 aaPredicted RBP11□□□□□ -0.65
UBE3C-208ENST00000497368 PITPNM1O00562 1244 aa11□□□□□ -0.65
UBE3C-208ENST00000497368 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
UBE3C-208ENST00000497368 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
UBE3C-208ENST00000497368 NESP48681 1621 aa10.94□□□□□ -0.66
UBE3C-208ENST00000497368 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
UBE3C-208ENST00000497368 THOC2Q8NI27 1593 aaKnown RBP10.92□□□□□ -0.66
UBE3C-208ENST00000497368 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
UBE3C-208ENST00000497368 FKBP8Q14318 412 aa10.91□□□□□ -0.66
UBE3C-208ENST00000497368 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
UBE3C-208ENST00000497368 WIZO95785 1651 aa10.89□□□□□ -0.67
UBE3C-208ENST00000497368 KIF21AQ7Z4S6 1674 aa10.89□□□□□ -0.67
UBE3C-208ENST00000497368 CUX2O14529 1486 aa10.86□□□□□ -0.67
UBE3C-208ENST00000497368 LAMC3Q9Y6N6 1575 aa10.83□□□□□ -0.68
UBE3C-208ENST00000497368 PROM2Q8N271 834 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms