RNA–Protein interactions for RNA: ENST00000488474.1

PRKAR1B-210, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

TSL 3

Gene PRKAR1B, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-210ENST00000488474 NISCHQ9Y2I1 1504 aa34.73■■■■□ 3.15
PRKAR1B-210ENST00000488474 CCDC180Q9P1Z9 1646 aa31.06■■■□□ 2.56
PRKAR1B-210ENST00000488474 ABCC9O60706 1549 aa30.49■■■□□ 2.47
PRKAR1B-210ENST00000488474 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
PRKAR1B-210ENST00000488474 NACADO15069 1562 aa29.22■■■□□ 2.27
PRKAR1B-210ENST00000488474 DCAF8L2P0C7V8 631 aa29.12■■■□□ 2.25
PRKAR1B-210ENST00000488474 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
PRKAR1B-210ENST00000488474 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
PRKAR1B-210ENST00000488474 DCAF1Q9Y4B6 1507 aa28.76■■■□□ 2.19
PRKAR1B-210ENST00000488474 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
PRKAR1B-210ENST00000488474 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.14
PRKAR1B-210ENST00000488474 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
PRKAR1B-210ENST00000488474 SCRIBQ14160 1630 aa28.29■■■□□ 2.12
PRKAR1B-210ENST00000488474 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
PRKAR1B-210ENST00000488474 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
PRKAR1B-210ENST00000488474 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
PRKAR1B-210ENST00000488474 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
PRKAR1B-210ENST00000488474 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
PRKAR1B-210ENST00000488474 SMARCA4P51532 1647 aa27.02■■□□□ 1.92
PRKAR1B-210ENST00000488474 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
PRKAR1B-210ENST00000488474 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
PRKAR1B-210ENST00000488474 NCAPD3P42695 1498 aa26.89■■□□□ 1.9
PRKAR1B-210ENST00000488474 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
PRKAR1B-210ENST00000488474 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
PRKAR1B-210ENST00000488474 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
PRKAR1B-210ENST00000488474 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
PRKAR1B-210ENST00000488474 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
PRKAR1B-210ENST00000488474 WIZO95785 1651 aa26.44■■□□□ 1.82
PRKAR1B-210ENST00000488474 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
PRKAR1B-210ENST00000488474 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
PRKAR1B-210ENST00000488474 LAMC3Q9Y6N6 1575 aa26.3■■□□□ 1.8
PRKAR1B-210ENST00000488474 NESP48681 1621 aa26.27■■□□□ 1.8
PRKAR1B-210ENST00000488474 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
PRKAR1B-210ENST00000488474 CUX2O14529 1486 aa26.17■■□□□ 1.78
PRKAR1B-210ENST00000488474 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.78
PRKAR1B-210ENST00000488474 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
PRKAR1B-210ENST00000488474 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
PRKAR1B-210ENST00000488474 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
PRKAR1B-210ENST00000488474 CFTRP13569 1480 aa25.91■■□□□ 1.74
PRKAR1B-210ENST00000488474 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
PRKAR1B-210ENST00000488474 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
PRKAR1B-210ENST00000488474 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
PRKAR1B-210ENST00000488474 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
PRKAR1B-210ENST00000488474 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
PRKAR1B-210ENST00000488474 WDR62O43379 1518 aa25.76■■□□□ 1.71
PRKAR1B-210ENST00000488474 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
PRKAR1B-210ENST00000488474 URB2Q14146 1524 aaKnown RBP25.55■■□□□ 1.68
PRKAR1B-210ENST00000488474 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
PRKAR1B-210ENST00000488474 DNAJC5Q9H3Z4 198 aa25.46■■□□□ 1.67
PRKAR1B-210ENST00000488474 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
PRKAR1B-210ENST00000488474 TOPBP1Q92547 1522 aa25.4■■□□□ 1.66
PRKAR1B-210ENST00000488474 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
PRKAR1B-210ENST00000488474 POLA1P09884 1462 aaPredicted RBP25.16■■□□□ 1.62
PRKAR1B-210ENST00000488474 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
PRKAR1B-210ENST00000488474 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
PRKAR1B-210ENST00000488474 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
PRKAR1B-210ENST00000488474 CUX1P39880 1505 aa25.11■■□□□ 1.61
PRKAR1B-210ENST00000488474 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
PRKAR1B-210ENST00000488474 SOGA1O94964 1423 aa25.06■■□□□ 1.6
PRKAR1B-210ENST00000488474 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
PRKAR1B-210ENST00000488474 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
PRKAR1B-210ENST00000488474 OSCARQ8IYS5 282 aa24.99■■□□□ 1.59
PRKAR1B-210ENST00000488474 AQRO60306 1485 aaKnown RBP eCLIP24.98■■□□□ 1.59
PRKAR1B-210ENST00000488474 WRNQ14191 1432 aaPredicted RBP eCLIP24.94■■□□□ 1.58
PRKAR1B-210ENST00000488474 TDRD9Q8NDG6 1382 aaKnown RBP24.92■■□□□ 1.58
PRKAR1B-210ENST00000488474 TOP2BQ02880 1626 aa24.89■■□□□ 1.57
PRKAR1B-210ENST00000488474 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
PRKAR1B-210ENST00000488474 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
PRKAR1B-210ENST00000488474 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
PRKAR1B-210ENST00000488474 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
PRKAR1B-210ENST00000488474 CHD1O14646 1710 aa24.83■■□□□ 1.57
PRKAR1B-210ENST00000488474 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
PRKAR1B-210ENST00000488474 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
PRKAR1B-210ENST00000488474 FBLN2P98095 1184 aa24.81■■□□□ 1.56
PRKAR1B-210ENST00000488474 GAPVD1Q14C86 1478 aa24.8■■□□□ 1.56
PRKAR1B-210ENST00000488474 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
PRKAR1B-210ENST00000488474 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
PRKAR1B-210ENST00000488474 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
PRKAR1B-210ENST00000488474 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
PRKAR1B-210ENST00000488474 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
PRKAR1B-210ENST00000488474 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
PRKAR1B-210ENST00000488474 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
PRKAR1B-210ENST00000488474 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
PRKAR1B-210ENST00000488474 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
PRKAR1B-210ENST00000488474 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
PRKAR1B-210ENST00000488474 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
PRKAR1B-210ENST00000488474 CLASP1Q7Z460 1538 aa24.53■■□□□ 1.52
PRKAR1B-210ENST00000488474 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
PRKAR1B-210ENST00000488474 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
PRKAR1B-210ENST00000488474 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
PRKAR1B-210ENST00000488474 CUL7Q14999 1698 aa24.37■■□□□ 1.49
PRKAR1B-210ENST00000488474 NUP160Q12769 1436 aa24.36■■□□□ 1.49
PRKAR1B-210ENST00000488474 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
PRKAR1B-210ENST00000488474 CEP170Q5SW79 1584 aa24.35■■□□□ 1.49
PRKAR1B-210ENST00000488474 CYB5RLQ6IPT4 315 aa24.34■■□□□ 1.49
PRKAR1B-210ENST00000488474 IGF1RP08069 1367 aa24.25■■□□□ 1.47
PRKAR1B-210ENST00000488474 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
PRKAR1B-210ENST00000488474 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
PRKAR1B-210ENST00000488474 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
PRKAR1B-210ENST00000488474 PRG4Q92954 1404 aaPredicted RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms