RNA–Protein interactions for RNA: ENST00000528077.5

MKNK1-220, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 2

Gene MKNK1, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-220ENST00000528077 NISCHQ9Y2I1 1504 aa46.05■■■■■ 4.96
MKNK1-220ENST00000528077 CCDC180Q9P1Z9 1646 aa40.23■■■■■ 4.03
MKNK1-220ENST00000528077 ZCCHC6Q5VYS8 1495 aaKnown RBP38.81■■■■□ 3.8
MKNK1-220ENST00000528077 DCAF1Q9Y4B6 1507 aa38.23■■■■□ 3.71
MKNK1-220ENST00000528077 MYO15BQ96JP2 1530 aa37.66■■■■□ 3.62
MKNK1-220ENST00000528077 DCAF8L2P0C7V8 631 aa37.58■■■■□ 3.61
MKNK1-220ENST00000528077 SHROOM4Q9ULL8 1493 aa37.57■■■■□ 3.6
MKNK1-220ENST00000528077 ABCC9O60706 1549 aa37.28■■■■□ 3.56
MKNK1-220ENST00000528077 NACADO15069 1562 aa37.26■■■■□ 3.55
MKNK1-220ENST00000528077 RB1CC1Q8TDY2 1594 aa36.83■■■■□ 3.49
MKNK1-220ENST00000528077 SCRIBQ14160 1630 aa36.79■■■■□ 3.48
MKNK1-220ENST00000528077 SUPT5HO00267 1087 aaKnown RBP36.36■■■■□ 3.41
MKNK1-220ENST00000528077 UNC13AQ9UPW8 1703 aa36.15■■■■□ 3.38
MKNK1-220ENST00000528077 RSF1Q96T23 1441 aaPredicted RBP35.79■■■■□ 3.32
MKNK1-220ENST00000528077 BAZ1AQ9NRL2 1556 aaPredicted RBP35.62■■■■□ 3.29
MKNK1-220ENST00000528077 CECR2Q9BXF3 1484 aa35.59■■■■□ 3.29
MKNK1-220ENST00000528077 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
MKNK1-220ENST00000528077 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.28
MKNK1-220ENST00000528077 SMARCA4P51532 1647 aa35.39■■■■□ 3.26
MKNK1-220ENST00000528077 WIZO95785 1651 aa35.3■■■■□ 3.24
MKNK1-220ENST00000528077 CHIC1Q5VXU3 224 aa35.08■■■■□ 3.21
MKNK1-220ENST00000528077 PABPN1Q86U42 306 aaKnown RBP eCLIP35.08■■■■□ 3.21
MKNK1-220ENST00000528077 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
MKNK1-220ENST00000528077 PEG3Q9GZU2 1588 aa34.99■■■■□ 3.19
MKNK1-220ENST00000528077 SMARCA2P51531 1590 aa34.75■■■■□ 3.15
MKNK1-220ENST00000528077 EIF4G1Q04637 1599 aaKnown RBP34.61■■■■□ 3.13
MKNK1-220ENST00000528077 ATAD2BQ9ULI0 1458 aa34.59■■■■□ 3.13
MKNK1-220ENST00000528077 CCDC88BA6NC98 1476 aa34.54■■■■□ 3.12
MKNK1-220ENST00000528077 BAZ1BQ9UIG0 1483 aaKnown RBP34.48■■■■□ 3.11
MKNK1-220ENST00000528077 HMGXB3Q12766 1538 aa34.38■■■■□ 3.09
MKNK1-220ENST00000528077 TRIM41Q8WV44 630 aa34.27■■■■□ 3.08
MKNK1-220ENST00000528077 NCAPD3P42695 1498 aa34.26■■■■□ 3.08
MKNK1-220ENST00000528077 ABCC8Q09428 1581 aa33.94■■■■□ 3.02
MKNK1-220ENST00000528077 CC2D2AQ9P2K1 1620 aa33.89■■■■□ 3.02
MKNK1-220ENST00000528077 PRDM2Q13029 1718 aa33.8■■■■□ 3
MKNK1-220ENST00000528077 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
MKNK1-220ENST00000528077 EEA1Q15075 1411 aa33.63■■■□□ 2.97
MKNK1-220ENST00000528077 CFTRP13569 1480 aa33.61■■■□□ 2.97
MKNK1-220ENST00000528077 LOC105371045A0A1W2PR82 267 aa33.6■■■□□ 2.97
MKNK1-220ENST00000528077 SYNJ1O43426 1573 aa33.59■■■□□ 2.97
MKNK1-220ENST00000528077 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
MKNK1-220ENST00000528077 TOP2BQ02880 1626 aa33.52■■■□□ 2.96
MKNK1-220ENST00000528077 FAM9AQ8IZU1 332 aaPredicted RBP33.48■■■□□ 2.95
MKNK1-220ENST00000528077 CADPSQ9ULU8 1353 aa33.37■■■□□ 2.93
MKNK1-220ENST00000528077 DNAJC5BQ9UF47 199 aa33.34■■■□□ 2.93
MKNK1-220ENST00000528077 SOGA1O94964 1423 aa33.31■■■□□ 2.92
MKNK1-220ENST00000528077 CUX1P39880 1505 aa33.22■■■□□ 2.91
MKNK1-220ENST00000528077 KIF21BO75037 1637 aa33.17■■■□□ 2.9
MKNK1-220ENST00000528077 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
MKNK1-220ENST00000528077 CSRNP3Q8WYN3 585 aa33.15■■■□□ 2.9
MKNK1-220ENST00000528077 RUSC2Q8N2Y8 1516 aa33.12■■■□□ 2.89
MKNK1-220ENST00000528077 GOLGA3Q08378 1498 aa33.1■■■□□ 2.89
MKNK1-220ENST00000528077 CEP164Q9UPV0 1460 aa33.07■■■□□ 2.88
MKNK1-220ENST00000528077 FANCD2Q9BXW9 1451 aa33.02■■■□□ 2.88
MKNK1-220ENST00000528077 TNIKQ9UKE5 1360 aa33.01■■■□□ 2.88
MKNK1-220ENST00000528077 DNMBPQ6XZF7 1577 aa32.92■■■□□ 2.86
MKNK1-220ENST00000528077 KIF27Q86VH2 1401 aa32.88■■■□□ 2.85
MKNK1-220ENST00000528077 EHMT2Q96KQ7 1210 aa32.87■■■□□ 2.85
MKNK1-220ENST00000528077 ERICH3Q5RHP9 1530 aa32.87■■■□□ 2.85
MKNK1-220ENST00000528077 CEP162Q5TB80 1403 aa32.84■■■□□ 2.85
MKNK1-220ENST00000528077 NESP48681 1621 aa32.83■■■□□ 2.85
MKNK1-220ENST00000528077 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
MKNK1-220ENST00000528077 PDS5BQ9NTI5 1447 aa32.79■■■□□ 2.84
MKNK1-220ENST00000528077 TOPBP1Q92547 1522 aa32.74■■■□□ 2.83
MKNK1-220ENST00000528077 UBTFP17480 764 aaKnown RBP32.74■■■□□ 2.83
MKNK1-220ENST00000528077 PRXQ9BXM0 1461 aa32.73■■■□□ 2.83
MKNK1-220ENST00000528077 RAPGEF2Q9Y4G8 1499 aa32.68■■■□□ 2.82
MKNK1-220ENST00000528077 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
MKNK1-220ENST00000528077 TRIM26Q12899 539 aaPredicted RBP32.65■■■□□ 2.82
MKNK1-220ENST00000528077 CUX2O14529 1486 aa32.64■■■□□ 2.82
MKNK1-220ENST00000528077 PCGF6Q9BYE7 350 aa32.59■■■□□ 2.81
MKNK1-220ENST00000528077 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
MKNK1-220ENST00000528077 POLA1P09884 1462 aaPredicted RBP32.58■■■□□ 2.81
MKNK1-220ENST00000528077 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
MKNK1-220ENST00000528077 URB2Q14146 1524 aaKnown RBP32.55■■■□□ 2.8
MKNK1-220ENST00000528077 CLIP1P30622 1438 aa32.51■■■□□ 2.79
MKNK1-220ENST00000528077 CUL7Q14999 1698 aa32.44■■■□□ 2.78
MKNK1-220ENST00000528077 IGF1RP08069 1367 aa32.41■■■□□ 2.78
MKNK1-220ENST00000528077 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
MKNK1-220ENST00000528077 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
MKNK1-220ENST00000528077 ABCA5Q8WWZ7 1642 aa32.34■■■□□ 2.77
MKNK1-220ENST00000528077 VPS8Q8N3P4 1428 aa32.32■■■□□ 2.76
MKNK1-220ENST00000528077 CARMIL1Q5VZK9 1371 aa32.31■■■□□ 2.76
MKNK1-220ENST00000528077 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
MKNK1-220ENST00000528077 WDR62O43379 1518 aa32.2■■■□□ 2.75
MKNK1-220ENST00000528077 CTTNBP2Q8WZ74 1663 aa32.16■■■□□ 2.74
MKNK1-220ENST00000528077 GAPVD1Q14C86 1478 aa32.15■■■□□ 2.74
MKNK1-220ENST00000528077 ARAP1Q96P48 1450 aa32.12■■■□□ 2.73
MKNK1-220ENST00000528077 PBRM1Q86U86 1689 aa32.11■■■□□ 2.73
MKNK1-220ENST00000528077 HRCP23327 699 aa32.11■■■□□ 2.73
MKNK1-220ENST00000528077 ARHGAP35Q9NRY4 1499 aa32.03■■■□□ 2.72
MKNK1-220ENST00000528077 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
MKNK1-220ENST00000528077 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
MKNK1-220ENST00000528077 THOC2Q8NI27 1593 aaKnown RBP32.01■■■□□ 2.72
MKNK1-220ENST00000528077 EFCAB5A4FU69 1503 aa31.99■■■□□ 2.71
MKNK1-220ENST00000528077 APLP2Q06481 763 aa31.98■■■□□ 2.71
MKNK1-220ENST00000528077 TDRD9Q8NDG6 1382 aaKnown RBP31.98■■■□□ 2.71
MKNK1-220ENST00000528077 PPARGC1BQ86YN6 1023 aaKnown RBP31.93■■■□□ 2.7
MKNK1-220ENST00000528077 ADAMTS12P58397 1594 aa31.89■■■□□ 2.7
MKNK1-220ENST00000528077 RANGAP1P46060 587 aaPredicted RBP31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms