RNA–Protein interactions for RNA: ENST00000467278.5

ACAP3-206, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 1 (best)

Gene ACAP3, Length 2,725 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-206ENST00000467278 NISCHQ9Y2I1 1504 aa34.83■■■■□ 3.17
ACAP3-206ENST00000467278 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
ACAP3-206ENST00000467278 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
ACAP3-206ENST00000467278 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
ACAP3-206ENST00000467278 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.3
ACAP3-206ENST00000467278 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
ACAP3-206ENST00000467278 MYO15BQ96JP2 1530 aa29.13■■■□□ 2.25
ACAP3-206ENST00000467278 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
ACAP3-206ENST00000467278 HRCP23327 699 aa28.77■■■□□ 2.2
ACAP3-206ENST00000467278 PCGF6Q9BYE7 350 aa28.71■■■□□ 2.19
ACAP3-206ENST00000467278 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
ACAP3-206ENST00000467278 PPARGC1BQ86YN6 1023 aaKnown RBP28.48■■■□□ 2.15
ACAP3-206ENST00000467278 LOC105371045A0A1W2PR82 267 aa28.46■■■□□ 2.15
ACAP3-206ENST00000467278 ABCC9O60706 1549 aa27.86■■■□□ 2.05
ACAP3-206ENST00000467278 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
ACAP3-206ENST00000467278 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
ACAP3-206ENST00000467278 FAM9AQ8IZU1 332 aaPredicted RBP27.71■■■□□ 2.03
ACAP3-206ENST00000467278 EHMT2Q96KQ7 1210 aa27.69■■■□□ 2.02
ACAP3-206ENST00000467278 RSF1Q96T23 1441 aaPredicted RBP27.68■■■□□ 2.02
ACAP3-206ENST00000467278 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
ACAP3-206ENST00000467278 NACADO15069 1562 aa27.58■■■□□ 2.01
ACAP3-206ENST00000467278 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
ACAP3-206ENST00000467278 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
ACAP3-206ENST00000467278 ZEB1P37275 1124 aaPredicted RBP27.14■■□□□ 1.94
ACAP3-206ENST00000467278 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
ACAP3-206ENST00000467278 WIZO95785 1651 aa26.93■■□□□ 1.9
ACAP3-206ENST00000467278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.91■■□□□ 1.9
ACAP3-206ENST00000467278 PELP1Q8IZL8 1130 aaKnown RBP26.9■■□□□ 1.9
ACAP3-206ENST00000467278 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
ACAP3-206ENST00000467278 TTBK1Q5TCY1 1321 aaPredicted RBP26.85■■□□□ 1.89
ACAP3-206ENST00000467278 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.89
ACAP3-206ENST00000467278 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
ACAP3-206ENST00000467278 CCER1Q8TC90 406 aaPredicted RBP26.71■■□□□ 1.87
ACAP3-206ENST00000467278 ABCC8Q09428 1581 aa26.59■■□□□ 1.85
ACAP3-206ENST00000467278 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.852e-7■■■■■ 27.9
ACAP3-206ENST00000467278 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
ACAP3-206ENST00000467278 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
ACAP3-206ENST00000467278 EIF4G1Q04637 1599 aaKnown RBP26.56■■□□□ 1.84
ACAP3-206ENST00000467278 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
ACAP3-206ENST00000467278 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
ACAP3-206ENST00000467278 SOGA1O94964 1423 aa26.46■■□□□ 1.83
ACAP3-206ENST00000467278 NEUROD1Q13562 356 aa26.45■■□□□ 1.83
ACAP3-206ENST00000467278 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
ACAP3-206ENST00000467278 DIEXFQ68CQ4 756 aaKnown RBP26.37■■□□□ 1.81
ACAP3-206ENST00000467278 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
ACAP3-206ENST00000467278 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
ACAP3-206ENST00000467278 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
ACAP3-206ENST00000467278 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
ACAP3-206ENST00000467278 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
ACAP3-206ENST00000467278 CSRNP3Q8WYN3 585 aa26.24■■□□□ 1.79
ACAP3-206ENST00000467278 TNIKQ9UKE5 1360 aa26.2■■□□□ 1.78
ACAP3-206ENST00000467278 GTF3C3Q9Y5Q9 886 aa26.19■■□□□ 1.78
ACAP3-206ENST00000467278 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
ACAP3-206ENST00000467278 HNRNPUL2Q1KMD3 747 aaKnown RBP26.07■■□□□ 1.76
ACAP3-206ENST00000467278 CENPBP07199 599 aaPredicted RBP26.01■■□□□ 1.75
ACAP3-206ENST00000467278 RANGAP1P46060 587 aaPredicted RBP26.01■■□□□ 1.75
ACAP3-206ENST00000467278 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
ACAP3-206ENST00000467278 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
ACAP3-206ENST00000467278 ZNF316A6NFI3 1004 aaPredicted RBP25.99■■□□□ 1.75
ACAP3-206ENST00000467278 GOLGA3Q08378 1498 aa25.96■■□□□ 1.75
ACAP3-206ENST00000467278 EEA1Q15075 1411 aa25.94■■□□□ 1.74
ACAP3-206ENST00000467278 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
ACAP3-206ENST00000467278 MIER1Q8N108 512 aa25.85■■□□□ 1.73
ACAP3-206ENST00000467278 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
ACAP3-206ENST00000467278 CLIP1P30622 1438 aa25.8■■□□□ 1.72
ACAP3-206ENST00000467278 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
ACAP3-206ENST00000467278 MYT1Q01538 1121 aa25.75■■□□□ 1.71
ACAP3-206ENST00000467278 RAPGEF2Q9Y4G8 1499 aa25.73■■□□□ 1.71
ACAP3-206ENST00000467278 VPS8Q8N3P4 1428 aa25.66■■□□□ 1.7
ACAP3-206ENST00000467278 APLP2Q06481 763 aa25.65■■□□□ 1.7
ACAP3-206ENST00000467278 KIF21BO75037 1637 aa25.62■■□□□ 1.69
ACAP3-206ENST00000467278 NCAPD3P42695 1498 aa25.54■■□□□ 1.68
ACAP3-206ENST00000467278 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
ACAP3-206ENST00000467278 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
ACAP3-206ENST00000467278 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
ACAP3-206ENST00000467278 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
ACAP3-206ENST00000467278 ARAP1Q96P48 1450 aa25.33■■□□□ 1.64
ACAP3-206ENST00000467278 ITGAEP38570 1179 aa25.31■■□□□ 1.64
ACAP3-206ENST00000467278 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
ACAP3-206ENST00000467278 PRXQ9BXM0 1461 aa25.27■■□□□ 1.64
ACAP3-206ENST00000467278 CFTRP13569 1480 aa25.25■■□□□ 1.63
ACAP3-206ENST00000467278 CUX1P39880 1505 aa25.22■■□□□ 1.63
ACAP3-206ENST00000467278 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.61
ACAP3-206ENST00000467278 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
ACAP3-206ENST00000467278 KCNH8Q96L42 1107 aa25.12■■□□□ 1.61
ACAP3-206ENST00000467278 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
ACAP3-206ENST00000467278 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
ACAP3-206ENST00000467278 SUPT16HQ9Y5B9 1047 aaKnown RBP25.08■■□□□ 1.61
ACAP3-206ENST00000467278 CCNB3Q8WWL7 1395 aa25.06■■□□□ 1.6
ACAP3-206ENST00000467278 ARHGAP35Q9NRY4 1499 aa25.06■■□□□ 1.6
ACAP3-206ENST00000467278 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
ACAP3-206ENST00000467278 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
ACAP3-206ENST00000467278 PRDM2Q13029 1718 aa25■■□□□ 1.59
ACAP3-206ENST00000467278 RAB3GAP2Q9H2M9 1393 aa24.96■■□□□ 1.59
ACAP3-206ENST00000467278 SIN3AQ96ST3 1273 aa24.92■■□□□ 1.58
ACAP3-206ENST00000467278 CUX2O14529 1486 aa24.91■■□□□ 1.58
ACAP3-206ENST00000467278 P3H3Q8IVL6 736 aa24.9■■□□□ 1.58
ACAP3-206ENST00000467278 IGF1RP08069 1367 aa24.87■■□□□ 1.57
ACAP3-206ENST00000467278 MAPKBP1O60336 1514 aa24.87■■□□□ 1.57
ACAP3-206ENST00000467278 HIRIP3Q9BW71 556 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms