Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH4Q9P003 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH4Q9P003 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH4Q9P003 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH4Q9P003 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.02■□□□□ 0.64
CNIH4Q9P003 SLC29A4P1-201ENST00000398760 971 ntBASIC19.02■□□□□ 0.64
CNIH4Q9P003 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNIH4Q9P003 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.02■□□□□ 0.64
CNIH4Q9P003 AC105036.2-201ENST00000569468 176 ntBASIC19.02■□□□□ 0.64
CNIH4Q9P003 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNIH4Q9P003 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CNIH4Q9P003 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.02■□□□□ 0.64
CNIH4Q9P003 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNIH4Q9P003 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.02■□□□□ 0.63
CNIH4Q9P003 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CNIH4Q9P003 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CNIH4Q9P003 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CNIH4Q9P003 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CNIH4Q9P003 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 TSPY6P-201ENST00000448518 926 ntBASIC19.01■□□□□ 0.63
CNIH4Q9P003 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.01■□□□□ 0.63
CNIH4Q9P003 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNIH4Q9P003 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CNIH4Q9P003 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CNIH4Q9P003 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19■□□□□ 0.63
CNIH4Q9P003 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19■□□□□ 0.63
CNIH4Q9P003 RARRES2P4-201ENST00000514074 484 ntBASIC19■□□□□ 0.63
CNIH4Q9P003 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19■□□□□ 0.63
CNIH4Q9P003 FAM21FP-204ENST00000608637 956 ntBASIC19■□□□□ 0.63
CNIH4Q9P003 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CNIH4Q9P003 AP005212.1-201ENST00000581547 1997 ntBASIC19■□□□□ 0.63
CNIH4Q9P003 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19■□□□□ 0.63
CNIH4Q9P003 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CNIH4Q9P003 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNIH4Q9P003 AC121338.2-201ENST00000622535 1744 ntBASIC19■□□□□ 0.63
CNIH4Q9P003 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19■□□□□ 0.63
CNIH4Q9P003 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CNIH4Q9P003 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.99■□□□□ 0.63
CNIH4Q9P003 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNIH4Q9P003 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.99■□□□□ 0.63
CNIH4Q9P003 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.99■□□□□ 0.63
CNIH4Q9P003 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH4Q9P003 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CNIH4Q9P003 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.98■□□□□ 0.63
CNIH4Q9P003 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.98■□□□□ 0.63
CNIH4Q9P003 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.98■□□□□ 0.63
CNIH4Q9P003 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.98■□□□□ 0.63
CNIH4Q9P003 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNIH4Q9P003 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNIH4Q9P003 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH4Q9P003 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms