RNA–Protein interactions for RNA: ENST00000413507.3

LACTB-202, Transcript of lactamase beta, humanhuman

TSL 1 (best) BASIC

Gene LACTB, Length 2,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LACTB-202ENST00000413507 NISCHQ9Y2I1 1504 aa40.73■■■■■ 4.11
LACTB-202ENST00000413507 SHROOM4Q9ULL8 1493 aa35.73■■■■□ 3.31
LACTB-202ENST00000413507 SUPT5HO00267 1087 aaKnown RBP35.13■■■■□ 3.21
LACTB-202ENST00000413507 DCAF8L2P0C7V8 631 aa34.76■■■■□ 3.16
LACTB-202ENST00000413507 ZCCHC6Q5VYS8 1495 aaKnown RBP34.41■■■■□ 3.1
LACTB-202ENST00000413507 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
LACTB-202ENST00000413507 CHIC1Q5VXU3 224 aa33.87■■■■□ 3.01
LACTB-202ENST00000413507 MYO15BQ96JP2 1530 aa33.78■■■■□ 3
LACTB-202ENST00000413507 PCGF6Q9BYE7 350 aa33.3■■■□□ 2.92
LACTB-202ENST00000413507 LOC105371045A0A1W2PR82 267 aa33.23■■■□□ 2.91
LACTB-202ENST00000413507 HRCP23327 699 aa33.07■■■□□ 2.88
LACTB-202ENST00000413507 DCAF1Q9Y4B6 1507 aa33■■■□□ 2.87
LACTB-202ENST00000413507 PPARGC1BQ86YN6 1023 aaKnown RBP32.85■■■□□ 2.85
LACTB-202ENST00000413507 SCRIBQ14160 1630 aa32.67■■■□□ 2.82
LACTB-202ENST00000413507 EHMT2Q96KQ7 1210 aa32.65■■■□□ 2.82
LACTB-202ENST00000413507 FAM9AQ8IZU1 332 aaPredicted RBP32.6■■■□□ 2.81
LACTB-202ENST00000413507 RSF1Q96T23 1441 aaPredicted RBP32.48■■■□□ 2.79
LACTB-202ENST00000413507 ABCC9O60706 1549 aa32.45■■■□□ 2.79
LACTB-202ENST00000413507 TRIM41Q8WV44 630 aa32.43■■■□□ 2.78
LACTB-202ENST00000413507 TRIM26Q12899 539 aaPredicted RBP32.24■■■□□ 2.75
LACTB-202ENST00000413507 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
LACTB-202ENST00000413507 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
LACTB-202ENST00000413507 MROH2BQ7Z745 1585 aa31.87■■■□□ 2.69
LACTB-202ENST00000413507 PELP1Q8IZL8 1130 aaKnown RBP31.86■■■□□ 2.69
LACTB-202ENST00000413507 WIZO95785 1651 aa31.69■■■□□ 2.66
LACTB-202ENST00000413507 NACADO15069 1562 aa31.69■■■□□ 2.66
LACTB-202ENST00000413507 TTBK1Q5TCY1 1321 aaPredicted RBP31.56■■■□□ 2.64
LACTB-202ENST00000413507 ZEB1P37275 1124 aaPredicted RBP31.39■■■□□ 2.62
LACTB-202ENST00000413507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.32■■■□□ 2.6
LACTB-202ENST00000413507 PABPN1Q86U42 306 aaKnown RBP eCLIP31.26■■■□□ 2.59
LACTB-202ENST00000413507 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
LACTB-202ENST00000413507 BAZ1AQ9NRL2 1556 aaPredicted RBP31.2■■■□□ 2.59
LACTB-202ENST00000413507 CCDC88BA6NC98 1476 aa31.13■■■□□ 2.57
LACTB-202ENST00000413507 CCER1Q8TC90 406 aaPredicted RBP31.12■■■□□ 2.57
LACTB-202ENST00000413507 SCAF1Q9H7N4 1312 aaKnown RBP31.03■■■□□ 2.56
LACTB-202ENST00000413507 SOGA1O94964 1423 aa31.02■■■□□ 2.56
LACTB-202ENST00000413507 UBTFP17480 764 aaKnown RBP30.99■■■□□ 2.55
LACTB-202ENST00000413507 EIF4G1Q04637 1599 aaKnown RBP30.99■■■□□ 2.55
LACTB-202ENST00000413507 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
LACTB-202ENST00000413507 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
LACTB-202ENST00000413507 RUSC2Q8N2Y8 1516 aa30.9■■■□□ 2.54
LACTB-202ENST00000413507 SMARCA2P51531 1590 aa30.87■■■□□ 2.53
LACTB-202ENST00000413507 CEP162Q5TB80 1403 aa30.83■■■□□ 2.53
LACTB-202ENST00000413507 CSRNP3Q8WYN3 585 aa30.82■■■□□ 2.52
LACTB-202ENST00000413507 RANGAP1P46060 587 aaPredicted RBP30.78■■■□□ 2.52
LACTB-202ENST00000413507 UNC13AQ9UPW8 1703 aa30.76■■■□□ 2.51
LACTB-202ENST00000413507 MYT1Q01538 1121 aa30.69■■■□□ 2.5
LACTB-202ENST00000413507 TNIKQ9UKE5 1360 aa30.61■■■□□ 2.49
LACTB-202ENST00000413507 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
LACTB-202ENST00000413507 WRNQ14191 1432 aaPredicted RBP eCLIP30.52■■■□□ 2.48
LACTB-202ENST00000413507 DIEXFQ68CQ4 756 aaKnown RBP30.51■■■□□ 2.47
LACTB-202ENST00000413507 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
LACTB-202ENST00000413507 NEUROD1Q13562 356 aa30.4■■■□□ 2.46
LACTB-202ENST00000413507 GOLGA3Q08378 1498 aa30.4■■■□□ 2.46
LACTB-202ENST00000413507 EEA1Q15075 1411 aa30.36■■■□□ 2.45
LACTB-202ENST00000413507 SYNJ1O43426 1573 aa30.31■■■□□ 2.44
LACTB-202ENST00000413507 ACIN1Q9UKV3 1341 aaKnown RBP30.27■■■□□ 2.44
LACTB-202ENST00000413507 ATAD2BQ9ULI0 1458 aa30.24■■■□□ 2.43
LACTB-202ENST00000413507 CLIP1P30622 1438 aa30.23■■■□□ 2.43
LACTB-202ENST00000413507 BAZ1BQ9UIG0 1483 aaKnown RBP30.21■■■□□ 2.43
LACTB-202ENST00000413507 APLP2Q06481 763 aa30.21■■■□□ 2.43
LACTB-202ENST00000413507 YTHDC1Q96MU7 727 aaKnown RBP30.18■■■□□ 2.42
LACTB-202ENST00000413507 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
LACTB-202ENST00000413507 RAPGEF2Q9Y4G8 1499 aa30.16■■■□□ 2.42
LACTB-202ENST00000413507 GTF3C3Q9Y5Q9 886 aa30.12■■■□□ 2.41
LACTB-202ENST00000413507 ZNF316A6NFI3 1004 aaPredicted RBP30.12■■■□□ 2.41
LACTB-202ENST00000413507 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
LACTB-202ENST00000413507 CENPBP07199 599 aaPredicted RBP30.01■■■□□ 2.4
LACTB-202ENST00000413507 VPS8Q8N3P4 1428 aa29.98■■■□□ 2.39
LACTB-202ENST00000413507 KIF21BO75037 1637 aa29.93■■■□□ 2.38
LACTB-202ENST00000413507 MIER1Q8N108 512 aa29.92■■■□□ 2.38
LACTB-202ENST00000413507 KANK4Q5T7N3 995 aaPredicted RBP29.86■■■□□ 2.37
LACTB-202ENST00000413507 ITGAEP38570 1179 aa29.8■■■□□ 2.36
LACTB-202ENST00000413507 TOP2BQ02880 1626 aa29.72■■■□□ 2.35
LACTB-202ENST00000413507 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
LACTB-202ENST00000413507 CUX1P39880 1505 aa29.6■■■□□ 2.33
LACTB-202ENST00000413507 PRXQ9BXM0 1461 aa29.6■■■□□ 2.33
LACTB-202ENST00000413507 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
LACTB-202ENST00000413507 DHX57Q6P158 1386 aaKnown RBP29.51■■■□□ 2.31
LACTB-202ENST00000413507 BIVM-ERCC5R4GMW8 1640 aa29.48■■■□□ 2.31
LACTB-202ENST00000413507 NCAPD3P42695 1498 aa29.47■■■□□ 2.31
LACTB-202ENST00000413507 P3H3Q8IVL6 736 aa29.47■■■□□ 2.31
LACTB-202ENST00000413507 ATP1B4Q9UN42 357 aaPredicted RBP29.46■■■□□ 2.31
LACTB-202ENST00000413507 ERICH3Q5RHP9 1530 aa29.41■■■□□ 2.3
LACTB-202ENST00000413507 ARHGAP35Q9NRY4 1499 aa29.36■■■□□ 2.29
LACTB-202ENST00000413507 CFTRP13569 1480 aa29.35■■■□□ 2.29
LACTB-202ENST00000413507 CUX2O14529 1486 aa29.35■■■□□ 2.29
LACTB-202ENST00000413507 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
LACTB-202ENST00000413507 CCNB3Q8WWL7 1395 aa29.3■■■□□ 2.28
LACTB-202ENST00000413507 IGF1RP08069 1367 aa29.28■■■□□ 2.28
LACTB-202ENST00000413507 FAM50AQ14320 339 aaKnown RBP29.26■■■□□ 2.27
LACTB-202ENST00000413507 RRBP1Q9P2E9 1410 aaKnown RBP29.22■■■□□ 2.27
LACTB-202ENST00000413507 CARMIL1Q5VZK9 1371 aa29.19■■■□□ 2.26
LACTB-202ENST00000413507 BCL11AQ9H165 835 aa29.18■■■□□ 2.26
LACTB-202ENST00000413507 CLSPNQ9HAW4 1339 aa29.18■■■□□ 2.26
LACTB-202ENST00000413507 RAB3GAP2Q9H2M9 1393 aa29.15■■■□□ 2.26
LACTB-202ENST00000413507 SIN3AQ96ST3 1273 aa29.13■■■□□ 2.25
LACTB-202ENST00000413507 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
LACTB-202ENST00000413507 KCNH8Q96L42 1107 aa29.12■■■□□ 2.25
LACTB-202ENST00000413507 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms