Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFP3Q96NJ6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 MIR4758-201ENST00000577688 71 ntBASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFP3Q96NJ6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 AC069152.1-201ENST00000438030 544 ntBASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZFP3Q96NJ6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 AC061975.6-201ENST00000579045 1553 ntBASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 AC245052.3-201ENST00000450182 901 ntBASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 AL138781.1-201ENST00000566567 1274 ntBASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFP3Q96NJ6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 MKRN4P-201ENST00000444706 1521 ntBASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZFP3Q96NJ6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZFP3Q96NJ6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZFP3Q96NJ6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms