Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
ZFP3Q96NJ6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
ZFP3Q96NJ6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.94■■■□□ 2.38
ZFP3Q96NJ6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ZFP3Q96NJ6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ZFP3Q96NJ6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ZFP3Q96NJ6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
ZFP3Q96NJ6 AL356512.1-201ENST00000607453 1739 ntBASIC29.45■■■□□ 2.3
ZFP3Q96NJ6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
ZFP3Q96NJ6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
ZFP3Q96NJ6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.91■■■□□ 2.22
ZFP3Q96NJ6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.77■■■□□ 2.2
ZFP3Q96NJ6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZFP3Q96NJ6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
ZFP3Q96NJ6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
ZFP3Q96NJ6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.55■■■□□ 2.16
ZFP3Q96NJ6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.54■■■□□ 2.16
ZFP3Q96NJ6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.47■■■□□ 2.15
ZFP3Q96NJ6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.43■■■□□ 2.14
ZFP3Q96NJ6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZFP3Q96NJ6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
ZFP3Q96NJ6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.29■■■□□ 2.12
ZFP3Q96NJ6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
ZFP3Q96NJ6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZFP3Q96NJ6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZFP3Q96NJ6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
ZFP3Q96NJ6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ZFP3Q96NJ6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
ZFP3Q96NJ6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ZFP3Q96NJ6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.74■■■□□ 2.03
ZFP3Q96NJ6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ZFP3Q96NJ6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ZFP3Q96NJ6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
ZFP3Q96NJ6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.66■■■□□ 2.02
ZFP3Q96NJ6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
ZFP3Q96NJ6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ZFP3Q96NJ6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ZFP3Q96NJ6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.6■■■□□ 2.01
ZFP3Q96NJ6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
ZFP3Q96NJ6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ZFP3Q96NJ6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.51■■□□□ 1.99
ZFP3Q96NJ6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ZFP3Q96NJ6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZFP3Q96NJ6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.43■■□□□ 1.98
ZFP3Q96NJ6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZFP3Q96NJ6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ZFP3Q96NJ6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ZFP3Q96NJ6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.23■■□□□ 1.95
ZFP3Q96NJ6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZFP3Q96NJ6 AC015813.7-201ENST00000623294 581 ntBASIC27.15■■□□□ 1.94
ZFP3Q96NJ6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZFP3Q96NJ6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.11■■□□□ 1.93
ZFP3Q96NJ6 AC006077.2-201ENST00000623591 457 ntBASIC27.11■■□□□ 1.93
ZFP3Q96NJ6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZFP3Q96NJ6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.09■■□□□ 1.93
ZFP3Q96NJ6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZFP3Q96NJ6 ZNRF2P1-201ENST00000441407 443 ntBASIC27■■□□□ 1.91
ZFP3Q96NJ6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZFP3Q96NJ6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZFP3Q96NJ6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
ZFP3Q96NJ6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZFP3Q96NJ6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZFP3Q96NJ6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.73■■□□□ 1.87
ZFP3Q96NJ6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZFP3Q96NJ6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZFP3Q96NJ6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.66■■□□□ 1.86
ZFP3Q96NJ6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
ZFP3Q96NJ6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.64■■□□□ 1.85
ZFP3Q96NJ6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
ZFP3Q96NJ6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
ZFP3Q96NJ6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZFP3Q96NJ6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
ZFP3Q96NJ6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZFP3Q96NJ6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZFP3Q96NJ6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
ZFP3Q96NJ6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZFP3Q96NJ6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ZFP3Q96NJ6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZFP3Q96NJ6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ZFP3Q96NJ6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ZFP3Q96NJ6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZFP3Q96NJ6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZFP3Q96NJ6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
ZFP3Q96NJ6 AP002365.1-201ENST00000603448 772 ntBASIC26.33■■□□□ 1.81
ZFP3Q96NJ6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZFP3Q96NJ6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZFP3Q96NJ6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.31■■□□□ 1.8
ZFP3Q96NJ6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.31■■□□□ 1.8
ZFP3Q96NJ6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZFP3Q96NJ6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZFP3Q96NJ6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZFP3Q96NJ6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZFP3Q96NJ6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZFP3Q96NJ6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ZFP3Q96NJ6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.18■■□□□ 1.78
ZFP3Q96NJ6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.17■■□□□ 1.78
ZFP3Q96NJ6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.17■■□□□ 1.78
ZFP3Q96NJ6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFP3Q96NJ6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.14■■□□□ 1.77
ZFP3Q96NJ6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms