Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 BHLHE23-202ENST00000612929 1109 ntBASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 U85056.1-201ENST00000616429 682 ntBASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV6A0A075B6T7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 AC005332.8-201ENST00000622750 2735 ntBASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV6A0A075B6T7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 PVT1_1.1-201ENST00000615125 194 ntBASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV6A0A075B6T7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 KRT18P60-201ENST00000312876 1297 ntBASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV6A0A075B6T7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms