Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ACTG1-202ENST00000570382 471 ntTSL 411.15□□□□□ -0.621e-10■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-211ENST00000575994 856 ntTSL 310.89□□□□□ -0.671e-10■■□□□ 13.8
PRPF8Q6P2Q9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.521e-10■■□□□ 13.8
PRPF8Q6P2Q9 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.62□□□□□ -0.711e-10■■□□□ 13.8
PRPF8Q6P2Q9 MAN2C1-219ENST00000564570 803 ntTSL 518.2■□□□□ 0.52e-13■■□□□ 13.8
PRPF8Q6P2Q9 ITIH3-207ENST00000467268 568 ntTSL 412.25□□□□□ -0.458e-18■■□□□ 13.8
PRPF8Q6P2Q9 GORASP2-205ENST00000455067 530 ntTSL 414.7□□□□□ -0.061e-7■■□□□ 13.8
PRPF8Q6P2Q9 HDGFL2-201ENST00000587016 870 ntTSL 315.76■□□□□ 0.112e-6■■□□□ 13.8
PRPF8Q6P2Q9 SLC2A8-205ENST00000419917 793 ntTSL 318.6■□□□□ 0.572e-11■■□□□ 13.8
PRPF8Q6P2Q9 TRAP1-215ENST00000576106 555 ntTSL 419.28■□□□□ 0.681e-14■■□□□ 13.8
PRPF8Q6P2Q9 TRAP1-211ENST00000574941 558 ntTSL 416.46■□□□□ 0.231e-14■■□□□ 13.8
PRPF8Q6P2Q9 RRP1-203ENST00000473988 627 ntTSL 35.46□□□□□ -1.543e-6■■□□□ 13.8
PRPF8Q6P2Q9 D2HGDH-212ENST00000468064 2298 ntTSL 1 (best)17.38■□□□□ 0.372e-7■■□□□ 13.8
PRPF8Q6P2Q9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.08□□□□□ -0.641e-7■■□□□ 13.8
PRPF8Q6P2Q9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.626e-7■■□□□ 13.8
PRPF8Q6P2Q9 MRPL10-204ENST00000421763 1576 ntTSL 218.11■□□□□ 0.496e-7■■□□□ 13.8
PRPF8Q6P2Q9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.84□□□□□ -0.036e-7■■□□□ 13.8
PRPF8Q6P2Q9 CD55-202ENST00000343420 978 ntTSL 514.61□□□□□ -0.072e-6■■□□□ 13.8
PRPF8Q6P2Q9 NCOR2-216ENST00000461081 2910 ntTSL 212.01□□□□□ -0.494e-7■■□□□ 13.8
PRPF8Q6P2Q9 RCL1-209ENST00000473230 441 ntTSL 35.63□□□□□ -1.512e-9■■□□□ 13.8
PRPF8Q6P2Q9 OTUD5-206ENST00000481142 402 ntTSL 24.98□□□□□ -1.618e-9■■□□□ 13.8
PRPF8Q6P2Q9 WDR1-217ENST00000515018 274 ntTSL 36.81□□□□□ -1.322e-9■■□□□ 13.8
PRPF8Q6P2Q9 RNF34-209ENST00000556562 542 ntTSL 215.5■□□□□ 0.071e-22■■□□□ 13.8
PRPF8Q6P2Q9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.241e-6■■□□□ 13.8
PRPF8Q6P2Q9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.91□□□□□ -0.51e-6■■□□□ 13.8
PRPF8Q6P2Q9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.611e-6■■□□□ 13.8
PRPF8Q6P2Q9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.643e-6■■□□□ 13.8
PRPF8Q6P2Q9 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.413e-6■■□□□ 13.8
PRPF8Q6P2Q9 AP1M1-206ENST00000586957 307 ntTSL 314.08□□□□□ -0.161e-8■■□□□ 13.8
PRPF8Q6P2Q9 AP1M1-213ENST00000591775 564 ntTSL 49.23□□□□□ -0.931e-8■■□□□ 13.8
PRPF8Q6P2Q9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.29■□□□□ 0.043e-18■■□□□ 13.8
PRPF8Q6P2Q9 GGA2-214ENST00000569182 587 ntTSL 49.04□□□□□ -0.963e-11■■□□□ 13.8
PRPF8Q6P2Q9 LRIG2-204ENST00000470000 365 ntTSL 21.53□□□□□ -2.163e-11■■□□□ 13.8
PRPF8Q6P2Q9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.652e-8■■□□□ 13.8
PRPF8Q6P2Q9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.022e-8■■□□□ 13.8
PRPF8Q6P2Q9 RCCD1-204ENST00000555737 3157 ntTSL 1 (best)13.82□□□□□ -0.22e-8■■□□□ 13.8
PRPF8Q6P2Q9 AKT2-230ENST00000578282 305 ntTSL 315.61■□□□□ 0.091e-8■■□□□ 13.8
PRPF8Q6P2Q9 AKT2-225ENST00000496089 982 ntTSL 514.99□□□□□ -0.011e-8■■□□□ 13.8
PRPF8Q6P2Q9 AKT2-237ENST00000580878 709 ntTSL 313.64□□□□□ -0.231e-8■■□□□ 13.8
PRPF8Q6P2Q9 AKT2-235ENST00000579345 561 ntTSL 213.01□□□□□ -0.331e-8■■□□□ 13.8
PRPF8Q6P2Q9 AKT2-218ENST00000483166 4454 ntTSL 210.81□□□□□ -0.681e-8■■□□□ 13.8
PRPF8Q6P2Q9 NRDC-209ENST00000483007 810 ntTSL 42.33□□□□□ -2.042e-8■■□□□ 13.8
PRPF8Q6P2Q9 LINC00843-202ENST00000444438 550 ntTSL 5 BASIC8.55□□□□□ -1.044e-7■■□□□ 13.8
PRPF8Q6P2Q9 LINC00843-201ENST00000429104 562 ntTSL 55.87□□□□□ -1.474e-7■■□□□ 13.8
PRPF8Q6P2Q9 PLXND1-214ENST00000512744 2662 ntTSL 1 (best)12.61□□□□□ -0.397e-7■■□□□ 13.8
PRPF8Q6P2Q9 SLC6A6-211ENST00000622810 565 ntTSL 414.43□□□□□ -0.14e-8■■□□□ 13.8
PRPF8Q6P2Q9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.17□□□□□ -0.35e-32■■□□□ 13.8
PRPF8Q6P2Q9 APOC3-204ENST00000470144 269 ntTSL 511.38□□□□□ -0.595e-32■■□□□ 13.8
PRPF8Q6P2Q9 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.845e-32■■□□□ 13.8
PRPF8Q6P2Q9 APOC3-203ENST00000433777 359 ntTSL 59.55□□□□□ -0.885e-32■■□□□ 13.8
PRPF8Q6P2Q9 ARHGEF1-221ENST00000600387 2272 ntTSL 313.41□□□□□ -0.266e-7■■□□□ 13.8
PRPF8Q6P2Q9 ZSWIM8-204ENST00000431225 1687 ntTSL 514.69□□□□□ -0.062e-6■■□□□ 13.8
PRPF8Q6P2Q9 PEX5-217ENST00000544456 579 ntTSL 416.19■□□□□ 0.184e-9■■□□□ 13.8
PRPF8Q6P2Q9 PEX5-213ENST00000540398 641 ntTSL 313.93□□□□□ -0.184e-9■■□□□ 13.8
PRPF8Q6P2Q9 CPNE7-206ENST00000532500 550 ntTSL 39.96□□□□□ -0.812e-6■■□□□ 13.7
PRPF8Q6P2Q9 FASTK-203ENST00000459800 449 ntTSL 214.9□□□□□ -0.022e-14■■□□□ 13.7
PRPF8Q6P2Q9 EPS8L2-216ENST00000530118 561 ntTSL 314.22□□□□□ -0.136e-18■■□□□ 13.7
PRPF8Q6P2Q9 CAMK1-203ENST00000411972 560 ntTSL 318.55■□□□□ 0.561e-7■■□□□ 13.7
PRPF8Q6P2Q9 AP1G2-209ENST00000554069 755 ntTSL 311.95□□□□□ -0.59e-13■■□□□ 13.7
PRPF8Q6P2Q9 AP1G2-233ENST00000557482 728 ntTSL 511.95□□□□□ -0.59e-13■■□□□ 13.7
PRPF8Q6P2Q9 AP1G2-210ENST00000554312 635 ntTSL 27.5□□□□□ -1.219e-13■■□□□ 13.7
PRPF8Q6P2Q9 PBX2-205ENST00000496171 1050 ntTSL 214.26□□□□□ -0.132e-9■■□□□ 13.7
PRPF8Q6P2Q9 SRRT-203ENST00000445337 446 ntTSL 35.12□□□□□ -1.597e-8■■□□□ 13.7
PRPF8Q6P2Q9 CCND1-204ENST00000539241 920 ntTSL 212.08□□□□□ -0.487e-15■■□□□ 13.7
PRPF8Q6P2Q9 PRAME-212ENST00000485532 709 ntTSL 310.94□□□□□ -0.668e-18■■□□□ 13.7
PRPF8Q6P2Q9 PRAME-208ENST00000438888 566 ntAPPRIS ALT2 TSL 410.74□□□□□ -0.698e-18■■□□□ 13.7
PRPF8Q6P2Q9 CARS2-233ENST00000620794 668 ntTSL 39.74□□□□□ -0.851e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZSWIM8-212ENST00000492395 4490 ntTSL 1 (best)10.57□□□□□ -0.721e-6■■□□□ 13.7
PRPF8Q6P2Q9 ACSM3-207ENST00000562251 1931 ntTSL 25.53□□□□□ -1.521e-9■■□□□ 13.7
PRPF8Q6P2Q9 EXOC7-219ENST00000592559 645 ntTSL 510.02□□□□□ -0.83e-9■■□□□ 13.7
PRPF8Q6P2Q9 NDUFA11-204ENST00000591341 403 ntTSL 213.88□□□□□ -0.199e-18■■□□□ 13.7
PRPF8Q6P2Q9 GALE-204ENST00000429356 957 ntTSL 511.74□□□□□ -0.531e-7■■□□□ 13.7
PRPF8Q6P2Q9 EP400NL-201ENST00000332441 2741 ntTSL 214.36□□□□□ -0.112e-6■■□□□ 13.7
PRPF8Q6P2Q9 NAGK-217ENST00000484984 582 ntTSL 313.89□□□□□ -0.195e-7■■□□□ 13.7
PRPF8Q6P2Q9 ACY1-228ENST00000638096 1466 nt14.02□□□□□ -0.172e-7■■□□□ 13.7
PRPF8Q6P2Q9 TM9SF4-203ENST00000417389 553 ntTSL 49.28□□□□□ -0.924e-11■■□□□ 13.7
PRPF8Q6P2Q9 VARS2-210ENST00000490699 719 ntTSL 38.94□□□□□ -0.985e-8■■□□□ 13.7
PRPF8Q6P2Q9 RBM39-204ENST00000374038 1026 ntTSL 513.06□□□□□ -0.321e-9■■□□□ 13.7
PRPF8Q6P2Q9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.8■□□□□ 0.288e-8■■□□□ 13.7
PRPF8Q6P2Q9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.168e-8■■□□□ 13.7
PRPF8Q6P2Q9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 08e-8■■□□□ 13.7
PRPF8Q6P2Q9 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.643e-6■■□□□ 13.7
PRPF8Q6P2Q9 SORBS3-211ENST00000521554 858 ntTSL 214.08□□□□□ -0.161e-6■■□□□ 13.7
PRPF8Q6P2Q9 ZNF444-210ENST00000592171 688 ntTSL 319.3■□□□□ 0.682e-8■■□□□ 13.7
PRPF8Q6P2Q9 AATK-210ENST00000576053 938 ntTSL 1 (best)18.43■□□□□ 0.546e-9■■□□□ 13.7
PRPF8Q6P2Q9 MAP3K10-205ENST00000594791 899 ntTSL 318.12■□□□□ 0.496e-9■■□□□ 13.7
PRPF8Q6P2Q9 MAP3K10-207ENST00000597986 2104 ntTSL 517.97■□□□□ 0.476e-9■■□□□ 13.7
PRPF8Q6P2Q9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.366e-9■■□□□ 13.7
PRPF8Q6P2Q9 ZNF444-204ENST00000587236 5565 ntTSL 212.6□□□□□ -0.392e-8■■□□□ 13.7
PRPF8Q6P2Q9 NMRAL1-218ENST00000576935 279 ntTSL 38.36□□□□□ -1.076e-9■■□□□ 13.7
PRPF8Q6P2Q9 C2CD2-206ENST00000482084 4123 ntTSL 28.06□□□□□ -1.124e-7■■□□□ 13.7
PRPF8Q6P2Q9 ARRB1-209ENST00000532447 701 ntTSL 57.71□□□□□ -1.186e-9■■□□□ 13.7
PRPF8Q6P2Q9 ELL-204ENST00000596915 623 ntTSL 313.64□□□□□ -0.235e-6■■□□□ 13.7
PRPF8Q6P2Q9 NPRL2-213ENST00000480296 2512 ntTSL 29.59□□□□□ -0.873e-6■■□□□ 13.7
PRPF8Q6P2Q9 PKP4-213ENST00000486254 1566 ntTSL 29.42□□□□□ -0.95e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.196e-10■■□□□ 13.7
PRPF8Q6P2Q9 MTG2-203ENST00000461411 973 ntTSL 314.09□□□□□ -0.154e-7■■□□□ 13.7
PRPF8Q6P2Q9 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC10.77□□□□□ -0.697e-8■■□□□ 13.7
PRPF8Q6P2Q9 HDAC10-220ENST00000497952 976 ntTSL 59.4□□□□□ -0.94e-8■■□□□ 13.7
PRPF8Q6P2Q9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.211e-8■■□□□ 13.7
Retrieved 100 of 73,762 protein–RNA pairs in 1975.8 ms