RNA–Protein interactions for RNA: ENST00000556562.1

RNF34-209, Transcript of ring finger protein 34, humanhuman

TSL 2

Gene RNF34, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34-209ENST00000556562 NISCHQ9Y2I1 1504 aa44.79■■■■■ 4.76
RNF34-209ENST00000556562 ABCC9O60706 1549 aa40.32■■■■■ 4.04
RNF34-209ENST00000556562 CCDC180Q9P1Z9 1646 aa40.12■■■■■ 4.01
RNF34-209ENST00000556562 RB1CC1Q8TDY2 1594 aa38.23■■■■□ 3.71
RNF34-209ENST00000556562 NACADO15069 1562 aa37.93■■■■□ 3.66
RNF34-209ENST00000556562 DCAF8L2P0C7V8 631 aa37.88■■■■□ 3.65
RNF34-209ENST00000556562 DNAJC5BQ9UF47 199 aa37.84■■■■□ 3.65
RNF34-209ENST00000556562 PABPN1Q86U42 306 aaKnown RBP eCLIP37.55■■■■□ 3.6
RNF34-209ENST00000556562 MYO15BQ96JP2 1530 aa37.36■■■■□ 3.57
RNF34-209ENST00000556562 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
RNF34-209ENST00000556562 BICRAQ9NZM4 1560 aa37.19■■■■□ 3.54
RNF34-209ENST00000556562 ZCCHC6Q5VYS8 1495 aaKnown RBP37.15■■■■□ 3.54
RNF34-209ENST00000556562 DCAF1Q9Y4B6 1507 aa36.9■■■■□ 3.5
RNF34-209ENST00000556562 SCRIBQ14160 1630 aa36.72■■■■□ 3.47
RNF34-209ENST00000556562 SHROOM4Q9ULL8 1493 aa36.55■■■■□ 3.44
RNF34-209ENST00000556562 CC2D2AQ9P2K1 1620 aa36.34■■■■□ 3.41
RNF34-209ENST00000556562 EIF4G1Q04637 1599 aaKnown RBP36.27■■■■□ 3.4
RNF34-209ENST00000556562 CECR2Q9BXF3 1484 aa36.26■■■■□ 3.4
RNF34-209ENST00000556562 NCAPD3P42695 1498 aa35.05■■■■□ 3.2
RNF34-209ENST00000556562 ATAD2BQ9ULI0 1458 aa35■■■■□ 3.19
RNF34-209ENST00000556562 SMARCA4P51532 1647 aa34.95■■■■□ 3.19
RNF34-209ENST00000556562 SMARCA2P51531 1590 aa34.83■■■■□ 3.17
RNF34-209ENST00000556562 HMGXB3Q12766 1538 aa34.8■■■■□ 3.16
RNF34-209ENST00000556562 ERCC6Q03468 1493 aa34.76■■■■□ 3.15
RNF34-209ENST00000556562 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
RNF34-209ENST00000556562 BAZ1BQ9UIG0 1483 aaKnown RBP34.66■■■■□ 3.14
RNF34-209ENST00000556562 NESP48681 1621 aa34.64■■■■□ 3.14
RNF34-209ENST00000556562 DNAJC5Q9H3Z4 198 aa34.63■■■■□ 3.13
RNF34-209ENST00000556562 CUX2O14529 1486 aa34.62■■■■□ 3.13
RNF34-209ENST00000556562 MROH2BQ7Z745 1585 aa34.57■■■■□ 3.13
RNF34-209ENST00000556562 PEG3Q9GZU2 1588 aa34.55■■■■□ 3.12
RNF34-209ENST00000556562 LAMC3Q9Y6N6 1575 aa34.24■■■■□ 3.07
RNF34-209ENST00000556562 THOC2Q8NI27 1593 aaKnown RBP34.23■■■■□ 3.07
RNF34-209ENST00000556562 WIZO95785 1651 aa34.14■■■■□ 3.06
RNF34-209ENST00000556562 KIF21AQ7Z4S6 1674 aa34.11■■■■□ 3.05
RNF34-209ENST00000556562 PDS5BQ9NTI5 1447 aa34.06■■■■□ 3.04
RNF34-209ENST00000556562 CADPSQ9ULU8 1353 aa34.01■■■■□ 3.04
RNF34-209ENST00000556562 MRC2Q9UBG0 1479 aa33.83■■■■□ 3.01
RNF34-209ENST00000556562 RSF1Q96T23 1441 aaPredicted RBP33.83■■■■□ 3.01
RNF34-209ENST00000556562 WDR62O43379 1518 aa33.74■■■□□ 2.99
RNF34-209ENST00000556562 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
RNF34-209ENST00000556562 CEP164Q9UPV0 1460 aa33.69■■■□□ 2.98
RNF34-209ENST00000556562 FANCD2Q9BXW9 1451 aa33.67■■■□□ 2.98
RNF34-209ENST00000556562 CFTRP13569 1480 aa33.62■■■□□ 2.97
RNF34-209ENST00000556562 URB2Q14146 1524 aaKnown RBP33.42■■■□□ 2.94
RNF34-209ENST00000556562 CCDC88BA6NC98 1476 aa33.32■■■□□ 2.92
RNF34-209ENST00000556562 TRIM41Q8WV44 630 aa33.24■■■□□ 2.91
RNF34-209ENST00000556562 PRDM2Q13029 1718 aa33.18■■■□□ 2.9
RNF34-209ENST00000556562 ZNF608Q9ULD9 1512 aaPredicted RBP33.04■■■□□ 2.88
RNF34-209ENST00000556562 OSCARQ8IYS5 282 aa33.03■■■□□ 2.88
RNF34-209ENST00000556562 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
RNF34-209ENST00000556562 IFT140Q96RY7 1462 aa32.99■■■□□ 2.87
RNF34-209ENST00000556562 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
RNF34-209ENST00000556562 EIF4G3O43432 1585 aaKnown RBP32.82■■■□□ 2.84
RNF34-209ENST00000556562 ABCC8Q09428 1581 aa32.82■■■□□ 2.84
RNF34-209ENST00000556562 TARBP1Q13395 1621 aaKnown RBP32.71■■■□□ 2.83
RNF34-209ENST00000556562 AQRO60306 1485 aaKnown RBP eCLIP32.71■■■□□ 2.83
RNF34-209ENST00000556562 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.83
RNF34-209ENST00000556562 RIMBP3CA6NJZ7 1639 aa32.68■■■□□ 2.82
RNF34-209ENST00000556562 RIMBP3BA6NNM3 1639 aa32.68■■■□□ 2.82
RNF34-209ENST00000556562 RIMBP3Q9UFD9 1639 aa32.68■■■□□ 2.82
RNF34-209ENST00000556562 RAD54L2Q9Y4B4 1467 aa32.63■■■□□ 2.81
RNF34-209ENST00000556562 ARHGEF11O15085 1522 aa32.59■■■□□ 2.81
RNF34-209ENST00000556562 CHD1O14646 1710 aa32.54■■■□□ 2.8
RNF34-209ENST00000556562 TDRD9Q8NDG6 1382 aaKnown RBP32.52■■■□□ 2.8
RNF34-209ENST00000556562 SOGA1O94964 1423 aa32.51■■■□□ 2.8
RNF34-209ENST00000556562 FGD5Q6ZNL6 1462 aa32.51■■■□□ 2.79
RNF34-209ENST00000556562 FBLN2P98095 1184 aa32.5■■■□□ 2.79
RNF34-209ENST00000556562 CUX1P39880 1505 aa32.48■■■□□ 2.79
RNF34-209ENST00000556562 SUPT5HO00267 1087 aaKnown RBP32.39■■■□□ 2.78
RNF34-209ENST00000556562 SNAPC4Q5SXM2 1469 aa32.39■■■□□ 2.78
RNF34-209ENST00000556562 CYB5RLQ6IPT4 315 aa32.34■■■□□ 2.77
RNF34-209ENST00000556562 ARAP1Q96P48 1450 aa32.3■■■□□ 2.76
RNF34-209ENST00000556562 WDR97A6NE52 1622 aa32.26■■■□□ 2.76
RNF34-209ENST00000556562 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
RNF34-209ENST00000556562 MAGI1Q96QZ7 1491 aaPredicted RBP32.21■■■□□ 2.75
RNF34-209ENST00000556562 CHMP7Q8WUX9 453 aaPredicted RBP32.2■■■□□ 2.75
RNF34-209ENST00000556562 CLASP1Q7Z460 1538 aa32.19■■■□□ 2.74
RNF34-209ENST00000556562 SYNJ2O15056 1496 aa32.13■■■□□ 2.73
RNF34-209ENST00000556562 GAPVD1Q14C86 1478 aa32.12■■■□□ 2.73
RNF34-209ENST00000556562 SYNJ1O43426 1573 aa32.11■■■□□ 2.73
RNF34-209ENST00000556562 PBRM1Q86U86 1689 aa32.09■■■□□ 2.73
RNF34-209ENST00000556562 ABCA10Q8WWZ4 1543 aa32.08■■■□□ 2.73
RNF34-209ENST00000556562 ABCA5Q8WWZ7 1642 aa32.06■■■□□ 2.72
RNF34-209ENST00000556562 TRHP20396 242 aaPredicted RBP31.99■■■□□ 2.71
RNF34-209ENST00000556562 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
RNF34-209ENST00000556562 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
RNF34-209ENST00000556562 BIVM-ERCC5R4GMW8 1640 aa31.88■■■□□ 2.69
RNF34-209ENST00000556562 ADAMTS12P58397 1594 aa31.85■■■□□ 2.69
RNF34-209ENST00000556562 GRIN2AQ12879 1464 aa31.84■■■□□ 2.69
RNF34-209ENST00000556562 ERCC6L2Q5T890 1561 aa31.77■■■□□ 2.68
RNF34-209ENST00000556562 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
RNF34-209ENST00000556562 NUP160Q12769 1436 aa31.72■■■□□ 2.67
RNF34-209ENST00000556562 FHAD1B1AJZ9 1412 aa31.71■■■□□ 2.67
RNF34-209ENST00000556562 ERICH3Q5RHP9 1530 aa31.65■■■□□ 2.66
RNF34-209ENST00000556562 SHROOM2Q13796 1616 aa31.56■■■□□ 2.64
RNF34-209ENST00000556562 PRG4Q92954 1404 aaPredicted RBP31.44■■■□□ 2.62
RNF34-209ENST00000556562 RUSC2Q8N2Y8 1516 aa31.39■■■□□ 2.62
RNF34-209ENST00000556562 JPH4Q96JJ6 628 aa31.37■■■□□ 2.61
RNF34-209ENST00000556562 IGF1RP08069 1367 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms