RNA–Protein interactions for RNA: ENST00000429104.1

LINC00843-201, long intergenic non-protein coding RNA 843, humanhuman

TSL 5

Gene LINC00843, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00843-201ENST00000429104 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
LINC00843-201ENST00000429104 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
LINC00843-201ENST00000429104 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
LINC00843-201ENST00000429104 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
LINC00843-201ENST00000429104 FOXD1Q16676 465 aa18.38■□□□□ 0.53
LINC00843-201ENST00000429104 MSH5O43196 834 aa17.42■□□□□ 0.38
LINC00843-201ENST00000429104 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
LINC00843-201ENST00000429104 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
LINC00843-201ENST00000429104 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
LINC00843-201ENST00000429104 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
LINC00843-201ENST00000429104 ADRA2BP18089 450 aa16.92■□□□□ 0.3
LINC00843-201ENST00000429104 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
LINC00843-201ENST00000429104 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
LINC00843-201ENST00000429104 MAPK8IP2Q13387 824 aaPredicted RBP15.6■□□□□ 0.09
LINC00843-201ENST00000429104 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
LINC00843-201ENST00000429104 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
LINC00843-201ENST00000429104 DCAF8L1A6NGE4 600 aa15.07■□□□□ 0
LINC00843-201ENST00000429104 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
LINC00843-201ENST00000429104 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
LINC00843-201ENST00000429104 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
LINC00843-201ENST00000429104 ABCC9O60706 1549 aa14.84□□□□□ -0.03
LINC00843-201ENST00000429104 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
LINC00843-201ENST00000429104 RNF39Q9H2S5 420 aa14.77□□□□□ -0.05
LINC00843-201ENST00000429104 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
LINC00843-201ENST00000429104 C1QBPQ07021 282 aaKnown RBP14.59□□□□□ -0.07
LINC00843-201ENST00000429104 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
LINC00843-201ENST00000429104 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
LINC00843-201ENST00000429104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.122e-10■■□□□ 13.3
LINC00843-201ENST00000429104 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
LINC00843-201ENST00000429104 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
LINC00843-201ENST00000429104 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
LINC00843-201ENST00000429104 NACADO15069 1562 aa14.1□□□□□ -0.15
LINC00843-201ENST00000429104 UNC13AQ9UPW8 1703 aa13.96□□□□□ -0.17
LINC00843-201ENST00000429104 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
LINC00843-201ENST00000429104 MYO15BQ96JP2 1530 aa13.88□□□□□ -0.19
LINC00843-201ENST00000429104 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
LINC00843-201ENST00000429104 CAPN15O75808 1086 aa13.83□□□□□ -0.2
LINC00843-201ENST00000429104 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00843-201ENST00000429104 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
LINC00843-201ENST00000429104 DSG3P32926 999 aa13.74□□□□□ -0.21
LINC00843-201ENST00000429104 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
LINC00843-201ENST00000429104 SCRIBQ14160 1630 aa13.73□□□□□ -0.21
LINC00843-201ENST00000429104 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
LINC00843-201ENST00000429104 APLP2Q06481 763 aa13.63□□□□□ -0.23
LINC00843-201ENST00000429104 KCNA4P22459 653 aa13.62□□□□□ -0.23
LINC00843-201ENST00000429104 POTEHQ6S545 545 aa13.59□□□□□ -0.23
LINC00843-201ENST00000429104 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
LINC00843-201ENST00000429104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.53□□□□□ -0.24
LINC00843-201ENST00000429104 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
LINC00843-201ENST00000429104 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
LINC00843-201ENST00000429104 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
LINC00843-201ENST00000429104 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
LINC00843-201ENST00000429104 ABCB7O75027 752 aa13.44□□□□□ -0.26
LINC00843-201ENST00000429104 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
LINC00843-201ENST00000429104 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
LINC00843-201ENST00000429104 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
LINC00843-201ENST00000429104 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
LINC00843-201ENST00000429104 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
LINC00843-201ENST00000429104 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
LINC00843-201ENST00000429104 POLA2Q14181 598 aa13.08□□□□□ -0.32
LINC00843-201ENST00000429104 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
LINC00843-201ENST00000429104 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
LINC00843-201ENST00000429104 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
LINC00843-201ENST00000429104 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
LINC00843-201ENST00000429104 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.34
LINC00843-201ENST00000429104 HMGXB3Q12766 1538 aa12.94□□□□□ -0.34
LINC00843-201ENST00000429104 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
LINC00843-201ENST00000429104 BAZ1BQ9UIG0 1483 aaKnown RBP12.91□□□□□ -0.34
LINC00843-201ENST00000429104 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.35
LINC00843-201ENST00000429104 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
LINC00843-201ENST00000429104 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
LINC00843-201ENST00000429104 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
LINC00843-201ENST00000429104 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
LINC00843-201ENST00000429104 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
LINC00843-201ENST00000429104 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
LINC00843-201ENST00000429104 WIZO95785 1651 aa12.82□□□□□ -0.36
LINC00843-201ENST00000429104 NESP48681 1621 aa12.77□□□□□ -0.36
LINC00843-201ENST00000429104 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
LINC00843-201ENST00000429104 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
LINC00843-201ENST00000429104 KIF21AQ7Z4S6 1674 aa12.71□□□□□ -0.37
LINC00843-201ENST00000429104 CUX2O14529 1486 aa12.7□□□□□ -0.38
LINC00843-201ENST00000429104 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
LINC00843-201ENST00000429104 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
LINC00843-201ENST00000429104 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
LINC00843-201ENST00000429104 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
LINC00843-201ENST00000429104 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
LINC00843-201ENST00000429104 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
LINC00843-201ENST00000429104 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
LINC00843-201ENST00000429104 CADPSQ9ULU8 1353 aa12.58□□□□□ -0.4
LINC00843-201ENST00000429104 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
LINC00843-201ENST00000429104 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
LINC00843-201ENST00000429104 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
LINC00843-201ENST00000429104 MRC2Q9UBG0 1479 aa12.52□□□□□ -0.41
LINC00843-201ENST00000429104 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.41
LINC00843-201ENST00000429104 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
LINC00843-201ENST00000429104 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
LINC00843-201ENST00000429104 HAX1O00165 279 aa12.49□□□□□ -0.41
LINC00843-201ENST00000429104 WDR62O43379 1518 aa12.47□□□□□ -0.41
LINC00843-201ENST00000429104 CFTRP13569 1480 aa12.46□□□□□ -0.41
LINC00843-201ENST00000429104 ZBTB22O15209 634 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms