RNA–Protein interactions for RNA: ENST00000591341.1

NDUFA11-204, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

TSL 2

Gene NDUFA11, Length 403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-204ENST00000591341 NISCHQ9Y2I1 1504 aa40.11■■■■■ 4.01
NDUFA11-204ENST00000591341 CCDC180Q9P1Z9 1646 aa35.86■■■■□ 3.33
NDUFA11-204ENST00000591341 ABCC9O60706 1549 aa35.47■■■■□ 3.27
NDUFA11-204ENST00000591341 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
NDUFA11-204ENST00000591341 NACADO15069 1562 aa33.77■■■■□ 3
NDUFA11-204ENST00000591341 DCAF8L2P0C7V8 631 aa33.69■■■□□ 2.98
NDUFA11-204ENST00000591341 MYO15BQ96JP2 1530 aa33.39■■■□□ 2.94
NDUFA11-204ENST00000591341 ZCCHC6Q5VYS8 1495 aaKnown RBP33.32■■■□□ 2.92
NDUFA11-204ENST00000591341 UNC13AQ9UPW8 1703 aa33.26■■■□□ 2.92
NDUFA11-204ENST00000591341 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
NDUFA11-204ENST00000591341 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
NDUFA11-204ENST00000591341 BICRAQ9NZM4 1560 aa32.96■■■□□ 2.87
NDUFA11-204ENST00000591341 DNAJC5BQ9UF47 199 aa32.93■■■□□ 2.86
NDUFA11-204ENST00000591341 SCRIBQ14160 1630 aa32.72■■■□□ 2.83
NDUFA11-204ENST00000591341 SHROOM4Q9ULL8 1493 aa32.45■■■□□ 2.79
NDUFA11-204ENST00000591341 EIF4G1Q04637 1599 aaKnown RBP32.09■■■□□ 2.73
NDUFA11-204ENST00000591341 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
NDUFA11-204ENST00000591341 CECR2Q9BXF3 1484 aa31.89■■■□□ 2.7
NDUFA11-204ENST00000591341 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
NDUFA11-204ENST00000591341 NCAPD3P42695 1498 aa31.15■■■□□ 2.58
NDUFA11-204ENST00000591341 ATAD2BQ9ULI0 1458 aa31.13■■■□□ 2.57
NDUFA11-204ENST00000591341 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
NDUFA11-204ENST00000591341 SMARCA2P51531 1590 aa31.06■■■□□ 2.56
NDUFA11-204ENST00000591341 HMGXB3Q12766 1538 aa30.98■■■□□ 2.55
NDUFA11-204ENST00000591341 MROH2BQ7Z745 1585 aa30.94■■■□□ 2.54
NDUFA11-204ENST00000591341 PEG3Q9GZU2 1588 aa30.9■■■□□ 2.54
NDUFA11-204ENST00000591341 BAZ1BQ9UIG0 1483 aaKnown RBP30.86■■■□□ 2.53
NDUFA11-204ENST00000591341 WIZO95785 1651 aa30.62■■■□□ 2.49
NDUFA11-204ENST00000591341 NESP48681 1621 aa30.6■■■□□ 2.49
NDUFA11-204ENST00000591341 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
NDUFA11-204ENST00000591341 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
NDUFA11-204ENST00000591341 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
NDUFA11-204ENST00000591341 CUX2O14529 1486 aa30.37■■■□□ 2.45
NDUFA11-204ENST00000591341 KIF21AQ7Z4S6 1674 aa30.27■■■□□ 2.44
NDUFA11-204ENST00000591341 CADPSQ9ULU8 1353 aa30.22■■■□□ 2.43
NDUFA11-204ENST00000591341 THOC2Q8NI27 1593 aaKnown RBP30.22■■■□□ 2.43
NDUFA11-204ENST00000591341 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
NDUFA11-204ENST00000591341 PDS5BQ9NTI5 1447 aa30.19■■■□□ 2.42
NDUFA11-204ENST00000591341 CFTRP13569 1480 aa29.97■■■□□ 2.39
NDUFA11-204ENST00000591341 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
NDUFA11-204ENST00000591341 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
NDUFA11-204ENST00000591341 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
NDUFA11-204ENST00000591341 CEP164Q9UPV0 1460 aa29.9■■■□□ 2.38
NDUFA11-204ENST00000591341 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
NDUFA11-204ENST00000591341 WDR62O43379 1518 aa29.86■■■□□ 2.37
NDUFA11-204ENST00000591341 PRDM2Q13029 1718 aa29.8■■■□□ 2.36
NDUFA11-204ENST00000591341 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
NDUFA11-204ENST00000591341 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
NDUFA11-204ENST00000591341 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
NDUFA11-204ENST00000591341 DNMBPQ6XZF7 1577 aa29.33■■■□□ 2.29
NDUFA11-204ENST00000591341 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
NDUFA11-204ENST00000591341 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
NDUFA11-204ENST00000591341 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
NDUFA11-204ENST00000591341 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
NDUFA11-204ENST00000591341 POLA1P09884 1462 aaPredicted RBP29.11■■■□□ 2.25
NDUFA11-204ENST00000591341 EIF4G3O43432 1585 aaKnown RBP29.1■■■□□ 2.25
NDUFA11-204ENST00000591341 CUX1P39880 1505 aa29.04■■■□□ 2.24
NDUFA11-204ENST00000591341 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
NDUFA11-204ENST00000591341 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
NDUFA11-204ENST00000591341 AQRO60306 1485 aaKnown RBP eCLIP29■■■□□ 2.23
NDUFA11-204ENST00000591341 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
NDUFA11-204ENST00000591341 SOGA1O94964 1423 aa28.98■■■□□ 2.23
NDUFA11-204ENST00000591341 TDRD9Q8NDG6 1382 aaKnown RBP28.88■■■□□ 2.21
NDUFA11-204ENST00000591341 CHD1O14646 1710 aa28.86■■■□□ 2.21
NDUFA11-204ENST00000591341 WDR97A6NE52 1622 aa28.82■■■□□ 2.2
NDUFA11-204ENST00000591341 TRIM41Q8WV44 630 aa28.8■■■□□ 2.2
NDUFA11-204ENST00000591341 FBLN2P98095 1184 aa28.72■■■□□ 2.19
NDUFA11-204ENST00000591341 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
NDUFA11-204ENST00000591341 BIVM-ERCC5R4GMW8 1640 aa28.7■■■□□ 2.19
NDUFA11-204ENST00000591341 RIMBP3CA6NJZ7 1639 aa28.69■■■□□ 2.18
NDUFA11-204ENST00000591341 RIMBP3BA6NNM3 1639 aa28.69■■■□□ 2.18
NDUFA11-204ENST00000591341 RIMBP3Q9UFD9 1639 aa28.69■■■□□ 2.18
NDUFA11-204ENST00000591341 SYNJ1O43426 1573 aa28.68■■■□□ 2.18
NDUFA11-204ENST00000591341 TOP2BQ02880 1626 aa28.68■■■□□ 2.18
NDUFA11-204ENST00000591341 PBRM1Q86U86 1689 aa28.67■■■□□ 2.18
NDUFA11-204ENST00000591341 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
NDUFA11-204ENST00000591341 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
NDUFA11-204ENST00000591341 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
NDUFA11-204ENST00000591341 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.17
NDUFA11-204ENST00000591341 ABCA5Q8WWZ7 1642 aa28.63■■■□□ 2.17
NDUFA11-204ENST00000591341 MAGI1Q96QZ7 1491 aaPredicted RBP28.63■■■□□ 2.17
NDUFA11-204ENST00000591341 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
NDUFA11-204ENST00000591341 CHMP7Q8WUX9 453 aaPredicted RBP28.55■■■□□ 2.16
NDUFA11-204ENST00000591341 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
NDUFA11-204ENST00000591341 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
NDUFA11-204ENST00000591341 ADAMTS12P58397 1594 aa28.38■■■□□ 2.13
NDUFA11-204ENST00000591341 ARAP1Q96P48 1450 aa28.36■■■□□ 2.13
NDUFA11-204ENST00000591341 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
NDUFA11-204ENST00000591341 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
NDUFA11-204ENST00000591341 ERICH3Q5RHP9 1530 aa28.31■■■□□ 2.12
NDUFA11-204ENST00000591341 FHAD1B1AJZ9 1412 aa28.27■■■□□ 2.12
NDUFA11-204ENST00000591341 CEP170Q5SW79 1584 aa28.24■■■□□ 2.11
NDUFA11-204ENST00000591341 NUP160Q12769 1436 aa28.19■■■□□ 2.1
NDUFA11-204ENST00000591341 ERCC6L2Q5T890 1561 aa28.1■■■□□ 2.09
NDUFA11-204ENST00000591341 KIF27Q86VH2 1401 aa28.09■■■□□ 2.09
NDUFA11-204ENST00000591341 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
NDUFA11-204ENST00000591341 IGF1RP08069 1367 aa28.03■■■□□ 2.08
NDUFA11-204ENST00000591341 CUL7Q14999 1698 aa28■■■□□ 2.07
NDUFA11-204ENST00000591341 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
NDUFA11-204ENST00000591341 TRHP20396 242 aaPredicted RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms