RNA–Protein interactions for RNA: ENST00000473988.1

RRP1-203, Transcript of ribosomal RNA processing 1, humanhuman

TSL 3

Gene RRP1, Length 627 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-203ENST00000473988 NISCHQ9Y2I1 1504 aa15.05■□□□□ -0
RRP1-203ENST00000473988 ABCC9O60706 1549 aa14.34□□□□□ -0.11
RRP1-203ENST00000473988 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
RRP1-203ENST00000473988 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
RRP1-203ENST00000473988 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
RRP1-203ENST00000473988 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.28
RRP1-203ENST00000473988 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
RRP1-203ENST00000473988 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
RRP1-203ENST00000473988 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
RRP1-203ENST00000473988 CHIC1Q5VXU3 224 aa13.16□□□□□ -0.3
RRP1-203ENST00000473988 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
RRP1-203ENST00000473988 NACADO15069 1562 aa13.07□□□□□ -0.32
RRP1-203ENST00000473988 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
RRP1-203ENST00000473988 CECR2Q9BXF3 1484 aa12.96□□□□□ -0.34
RRP1-203ENST00000473988 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
RRP1-203ENST00000473988 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
RRP1-203ENST00000473988 MYO15BQ96JP2 1530 aa12.71□□□□□ -0.38
RRP1-203ENST00000473988 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
RRP1-203ENST00000473988 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
RRP1-203ENST00000473988 CUX2O14529 1486 aa12.52□□□□□ -0.41
RRP1-203ENST00000473988 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
RRP1-203ENST00000473988 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
RRP1-203ENST00000473988 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
RRP1-203ENST00000473988 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
RRP1-203ENST00000473988 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
RRP1-203ENST00000473988 NESP48681 1621 aa12.16□□□□□ -0.46
RRP1-203ENST00000473988 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
RRP1-203ENST00000473988 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
RRP1-203ENST00000473988 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
RRP1-203ENST00000473988 SMARCA2P51531 1590 aa11.97□□□□□ -0.49
RRP1-203ENST00000473988 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
RRP1-203ENST00000473988 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
RRP1-203ENST00000473988 PDS5BQ9NTI5 1447 aa11.91□□□□□ -0.5
RRP1-203ENST00000473988 LAMC3Q9Y6N6 1575 aa11.88□□□□□ -0.51
RRP1-203ENST00000473988 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
RRP1-203ENST00000473988 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
RRP1-203ENST00000473988 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
RRP1-203ENST00000473988 MRC2Q9UBG0 1479 aa11.82□□□□□ -0.52
RRP1-203ENST00000473988 SMARCA4P51532 1647 aa11.81□□□□□ -0.52
RRP1-203ENST00000473988 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
RRP1-203ENST00000473988 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
RRP1-203ENST00000473988 WDR62O43379 1518 aa11.78□□□□□ -0.52
RRP1-203ENST00000473988 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
RRP1-203ENST00000473988 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
RRP1-203ENST00000473988 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
RRP1-203ENST00000473988 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
RRP1-203ENST00000473988 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
RRP1-203ENST00000473988 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
RRP1-203ENST00000473988 CEP164Q9UPV0 1460 aa11.65□□□□□ -0.54
RRP1-203ENST00000473988 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
RRP1-203ENST00000473988 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
RRP1-203ENST00000473988 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
RRP1-203ENST00000473988 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
RRP1-203ENST00000473988 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
RRP1-203ENST00000473988 ZNF608Q9ULD9 1512 aaPredicted RBP11.54□□□□□ -0.56
RRP1-203ENST00000473988 CFTRP13569 1480 aa11.5□□□□□ -0.57
RRP1-203ENST00000473988 FBLN2P98095 1184 aa11.46□□□□□ -0.57
RRP1-203ENST00000473988 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
RRP1-203ENST00000473988 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
RRP1-203ENST00000473988 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
RRP1-203ENST00000473988 WIZO95785 1651 aa11.4□□□□□ -0.59
RRP1-203ENST00000473988 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.59
RRP1-203ENST00000473988 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
RRP1-203ENST00000473988 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
RRP1-203ENST00000473988 CHD1O14646 1710 aa11.32□□□□□ -0.6
RRP1-203ENST00000473988 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
RRP1-203ENST00000473988 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
RRP1-203ENST00000473988 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
RRP1-203ENST00000473988 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
RRP1-203ENST00000473988 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
RRP1-203ENST00000473988 KDM4FA0A1W2PPD8 638 aa11.22□□□□□ -0.61
RRP1-203ENST00000473988 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
RRP1-203ENST00000473988 GAPVD1Q14C86 1478 aa11.22□□□□□ -0.61
RRP1-203ENST00000473988 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
RRP1-203ENST00000473988 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
RRP1-203ENST00000473988 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
RRP1-203ENST00000473988 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
RRP1-203ENST00000473988 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
RRP1-203ENST00000473988 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
RRP1-203ENST00000473988 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
RRP1-203ENST00000473988 SOGA1O94964 1423 aa11.16□□□□□ -0.62
RRP1-203ENST00000473988 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
RRP1-203ENST00000473988 MAGI1Q96QZ7 1491 aaPredicted RBP11.11□□□□□ -0.63
RRP1-203ENST00000473988 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
RRP1-203ENST00000473988 ERCC6L2Q5T890 1561 aa11.08□□□□□ -0.64
RRP1-203ENST00000473988 GRIN2BQ13224 1484 aa11.08□□□□□ -0.64
RRP1-203ENST00000473988 FAM69CQ0P6D2 419 aa11.07□□□□□ -0.64
RRP1-203ENST00000473988 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
RRP1-203ENST00000473988 KIF13AQ9H1H9 1805 aa11□□□□□ -0.65
RRP1-203ENST00000473988 WDR97A6NE52 1622 aa11□□□□□ -0.65
RRP1-203ENST00000473988 ABCC10Q5T3U5 1492 aa10.98□□□□□ -0.65
RRP1-203ENST00000473988 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
RRP1-203ENST00000473988 NPM1P06748 294 aaKnown RBP eCLIP10.95□□□□□ -0.66
RRP1-203ENST00000473988 FBXO41Q8TF61 875 aa10.95□□□□□ -0.66
RRP1-203ENST00000473988 GRIN2AQ12879 1464 aa10.93□□□□□ -0.66
RRP1-203ENST00000473988 NUP160Q12769 1436 aa10.93□□□□□ -0.66
RRP1-203ENST00000473988 CUX1P39880 1505 aa10.93□□□□□ -0.66
RRP1-203ENST00000473988 KDM6BO15054 1643 aa10.92□□□□□ -0.66
RRP1-203ENST00000473988 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
RRP1-203ENST00000473988 PRG4Q92954 1404 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms