RNA–Protein interactions for RNA: ENST00000512744.5

PLXND1-214, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 2,662 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-214ENST00000512744 NISCHQ9Y2I1 1504 aa33.82■■■■□ 3.01
PLXND1-214ENST00000512744 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
PLXND1-214ENST00000512744 SUPT5HO00267 1087 aaKnown RBP29.03■■■□□ 2.24
PLXND1-214ENST00000512744 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
PLXND1-214ENST00000512744 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
PLXND1-214ENST00000512744 CCDC180Q9P1Z9 1646 aa28.35■■■□□ 2.13
PLXND1-214ENST00000512744 MYO15BQ96JP2 1530 aa28.19■■■□□ 2.1
PLXND1-214ENST00000512744 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
PLXND1-214ENST00000512744 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
PLXND1-214ENST00000512744 LOC105371045A0A1W2PR82 267 aa27.57■■■□□ 2
PLXND1-214ENST00000512744 HRCP23327 699 aa27.57■■■□□ 2
PLXND1-214ENST00000512744 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.99
PLXND1-214ENST00000512744 PPARGC1BQ86YN6 1023 aaKnown RBP27.37■■□□□ 1.97
PLXND1-214ENST00000512744 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
PLXND1-214ENST00000512744 ABCC9O60706 1549 aa27.01■■□□□ 1.91
PLXND1-214ENST00000512744 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
PLXND1-214ENST00000512744 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
PLXND1-214ENST00000512744 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
PLXND1-214ENST00000512744 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
PLXND1-214ENST00000512744 TRIM26Q12899 539 aaPredicted RBP26.78■■□□□ 1.88
PLXND1-214ENST00000512744 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
PLXND1-214ENST00000512744 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.86
PLXND1-214ENST00000512744 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
PLXND1-214ENST00000512744 WIZO95785 1651 aa26.34■■□□□ 1.81
PLXND1-214ENST00000512744 NACADO15069 1562 aa26.26■■□□□ 1.79
PLXND1-214ENST00000512744 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
PLXND1-214ENST00000512744 TTBK1Q5TCY1 1321 aaPredicted RBP26.04■■□□□ 1.76
PLXND1-214ENST00000512744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.98■■□□□ 1.75
PLXND1-214ENST00000512744 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
PLXND1-214ENST00000512744 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
PLXND1-214ENST00000512744 EIF4G1Q04637 1599 aaKnown RBP25.89■■□□□ 1.74
PLXND1-214ENST00000512744 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
PLXND1-214ENST00000512744 SOGA1O94964 1423 aa25.76■■□□□ 1.71
PLXND1-214ENST00000512744 CCER1Q8TC90 406 aaPredicted RBP25.76■■□□□ 1.71
PLXND1-214ENST00000512744 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
PLXND1-214ENST00000512744 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
PLXND1-214ENST00000512744 SCAF1Q9H7N4 1312 aaKnown RBP25.7■■□□□ 1.71
PLXND1-214ENST00000512744 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
PLXND1-214ENST00000512744 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
PLXND1-214ENST00000512744 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
PLXND1-214ENST00000512744 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
PLXND1-214ENST00000512744 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
PLXND1-214ENST00000512744 UBTFP17480 764 aaKnown RBP25.57■■□□□ 1.68
PLXND1-214ENST00000512744 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
PLXND1-214ENST00000512744 TNIKQ9UKE5 1360 aa25.42■■□□□ 1.66
PLXND1-214ENST00000512744 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
PLXND1-214ENST00000512744 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
PLXND1-214ENST00000512744 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
PLXND1-214ENST00000512744 DIEXFQ68CQ4 756 aaKnown RBP25.33■■□□□ 1.65
PLXND1-214ENST00000512744 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
PLXND1-214ENST00000512744 HNRNPUL2Q1KMD3 747 aaKnown RBP25.26■■□□□ 1.63
PLXND1-214ENST00000512744 ACIN1Q9UKV3 1341 aaKnown RBP25.23■■□□□ 1.63
PLXND1-214ENST00000512744 GOLGA3Q08378 1498 aa25.22■■□□□ 1.63
PLXND1-214ENST00000512744 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
PLXND1-214ENST00000512744 EEA1Q15075 1411 aa25.19■■□□□ 1.62
PLXND1-214ENST00000512744 GTF3C3Q9Y5Q9 886 aa25.07■■□□□ 1.6
PLXND1-214ENST00000512744 CLIP1P30622 1438 aa25.06■■□□□ 1.6
PLXND1-214ENST00000512744 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
PLXND1-214ENST00000512744 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
PLXND1-214ENST00000512744 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
PLXND1-214ENST00000512744 ZNF316A6NFI3 1004 aaPredicted RBP25.02■■□□□ 1.6
PLXND1-214ENST00000512744 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
PLXND1-214ENST00000512744 YTHDC1Q96MU7 727 aaKnown RBP25■■□□□ 1.59
PLXND1-214ENST00000512744 BAZ1BQ9UIG0 1483 aaKnown RBP24.99■■□□□ 1.59
PLXND1-214ENST00000512744 KIF21BO75037 1637 aa24.92■■□□□ 1.58
PLXND1-214ENST00000512744 VPS8Q8N3P4 1428 aa24.9■■□□□ 1.58
PLXND1-214ENST00000512744 MIER1Q8N108 512 aa24.89■■□□□ 1.57
PLXND1-214ENST00000512744 CENPBP07199 599 aaPredicted RBP24.88■■□□□ 1.57
PLXND1-214ENST00000512744 APLP2Q06481 763 aa24.87■■□□□ 1.57
PLXND1-214ENST00000512744 PELP1Q8IZL8 1130 aaKnown RBP24.83■■□□□ 1.57
PLXND1-214ENST00000512744 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
PLXND1-214ENST00000512744 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
PLXND1-214ENST00000512744 ARAP1Q96P48 1450 aa24.64■■□□□ 1.53
PLXND1-214ENST00000512744 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
PLXND1-214ENST00000512744 CUX1P39880 1505 aa24.58■■□□□ 1.53
PLXND1-214ENST00000512744 ITGAEP38570 1179 aa24.58■■□□□ 1.53
PLXND1-214ENST00000512744 DHX57Q6P158 1386 aaKnown RBP24.55■■□□□ 1.52
PLXND1-214ENST00000512744 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
PLXND1-214ENST00000512744 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
PLXND1-214ENST00000512744 KIF27Q86VH2 1401 aa24.43■■□□□ 1.5
PLXND1-214ENST00000512744 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
PLXND1-214ENST00000512744 ARHGAP35Q9NRY4 1499 aa24.39■■□□□ 1.5
PLXND1-214ENST00000512744 CFTRP13569 1480 aa24.34■■□□□ 1.49
PLXND1-214ENST00000512744 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
PLXND1-214ENST00000512744 RRBP1Q9P2E9 1410 aaKnown RBP24.32■■□□□ 1.48
PLXND1-214ENST00000512744 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
PLXND1-214ENST00000512744 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
PLXND1-214ENST00000512744 CUX2O14529 1486 aa24.28■■□□□ 1.48
PLXND1-214ENST00000512744 IGF1RP08069 1367 aa24.28■■□□□ 1.48
PLXND1-214ENST00000512744 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
PLXND1-214ENST00000512744 KCNH8Q96L42 1107 aa24.24■■□□□ 1.47
PLXND1-214ENST00000512744 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
PLXND1-214ENST00000512744 RAB3GAP2Q9H2M9 1393 aa24.19■■□□□ 1.46
PLXND1-214ENST00000512744 SIN3AQ96ST3 1273 aa24.16■■□□□ 1.46
PLXND1-214ENST00000512744 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
PLXND1-214ENST00000512744 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
PLXND1-214ENST00000512744 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
PLXND1-214ENST00000512744 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
PLXND1-214ENST00000512744 MAPKBP1O60336 1514 aa24.09■■□□□ 1.45
PLXND1-214ENST00000512744 HIRIP3Q9BW71 556 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms