RNA–Protein interactions for RNA: ENST00000596915.1

ELL-204, Transcript of elongation factor for RNA polymerase II, humanhuman

TSL 3

Gene ELL, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL-204ENST00000596915 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
ELL-204ENST00000596915 CCDC180Q9P1Z9 1646 aa35.15■■■■□ 3.22
ELL-204ENST00000596915 ABCC9O60706 1549 aa34.59■■■■□ 3.13
ELL-204ENST00000596915 RB1CC1Q8TDY2 1594 aa33.17■■■□□ 2.9
ELL-204ENST00000596915 NACADO15069 1562 aa33■■■□□ 2.87
ELL-204ENST00000596915 DCAF8L2P0C7V8 631 aa32.91■■■□□ 2.86
ELL-204ENST00000596915 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
ELL-204ENST00000596915 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
ELL-204ENST00000596915 UNC13AQ9UPW8 1703 aa32.58■■■□□ 2.81
ELL-204ENST00000596915 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
ELL-204ENST00000596915 PABPN1Q86U42 306 aaKnown RBP eCLIP32.18■■■□□ 2.74
ELL-204ENST00000596915 BICRAQ9NZM4 1560 aa32.12■■■□□ 2.73
ELL-204ENST00000596915 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
ELL-204ENST00000596915 DNAJC5BQ9UF47 199 aa31.79■■■□□ 2.68
ELL-204ENST00000596915 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
ELL-204ENST00000596915 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
ELL-204ENST00000596915 CC2D2AQ9P2K1 1620 aa31.31■■■□□ 2.6
ELL-204ENST00000596915 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
ELL-204ENST00000596915 SMARCA4P51532 1647 aa30.61■■■□□ 2.49
ELL-204ENST00000596915 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
ELL-204ENST00000596915 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
ELL-204ENST00000596915 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
ELL-204ENST00000596915 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
ELL-204ENST00000596915 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
ELL-204ENST00000596915 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
ELL-204ENST00000596915 PEG3Q9GZU2 1588 aa30.21■■■□□ 2.43
ELL-204ENST00000596915 BAZ1BQ9UIG0 1483 aaKnown RBP30.2■■■□□ 2.43
ELL-204ENST00000596915 WIZO95785 1651 aa30.03■■■□□ 2.4
ELL-204ENST00000596915 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
ELL-204ENST00000596915 NESP48681 1621 aa29.84■■■□□ 2.37
ELL-204ENST00000596915 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
ELL-204ENST00000596915 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
ELL-204ENST00000596915 TOP2AP11388 1531 aaKnown RBP29.64■■■□□ 2.34
ELL-204ENST00000596915 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
ELL-204ENST00000596915 CUX2O14529 1486 aa29.56■■■□□ 2.32
ELL-204ENST00000596915 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
ELL-204ENST00000596915 CADPSQ9ULU8 1353 aa29.46■■■□□ 2.31
ELL-204ENST00000596915 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.31
ELL-204ENST00000596915 PRDM2Q13029 1718 aa29.33■■■□□ 2.29
ELL-204ENST00000596915 CFTRP13569 1480 aa29.25■■■□□ 2.27
ELL-204ENST00000596915 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
ELL-204ENST00000596915 MRC2Q9UBG0 1479 aa29.24■■■□□ 2.27
ELL-204ENST00000596915 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
ELL-204ENST00000596915 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
ELL-204ENST00000596915 WDR62O43379 1518 aa29.16■■■□□ 2.26
ELL-204ENST00000596915 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
ELL-204ENST00000596915 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
ELL-204ENST00000596915 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
ELL-204ENST00000596915 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
ELL-204ENST00000596915 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
ELL-204ENST00000596915 ABCC8Q09428 1581 aa28.66■■■□□ 2.18
ELL-204ENST00000596915 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
ELL-204ENST00000596915 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
ELL-204ENST00000596915 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
ELL-204ENST00000596915 TARBP1Q13395 1621 aaKnown RBP28.47■■■□□ 2.15
ELL-204ENST00000596915 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
ELL-204ENST00000596915 CUX1P39880 1505 aa28.43■■■□□ 2.14
ELL-204ENST00000596915 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.13
ELL-204ENST00000596915 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
ELL-204ENST00000596915 SOGA1O94964 1423 aa28.29■■■□□ 2.12
ELL-204ENST00000596915 CHD1O14646 1710 aa28.28■■■□□ 2.12
ELL-204ENST00000596915 WDR97A6NE52 1622 aa28.28■■■□□ 2.12
ELL-204ENST00000596915 AQRO60306 1485 aaKnown RBP eCLIP28.27■■■□□ 2.123e-7■■■■□ 25.1
ELL-204ENST00000596915 BIVM-ERCC5R4GMW8 1640 aa28.19■■■□□ 2.1
ELL-204ENST00000596915 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
ELL-204ENST00000596915 PBRM1Q86U86 1689 aa28.17■■■□□ 2.1
ELL-204ENST00000596915 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
ELL-204ENST00000596915 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
ELL-204ENST00000596915 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
ELL-204ENST00000596915 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
ELL-204ENST00000596915 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
ELL-204ENST00000596915 ABCA5Q8WWZ7 1642 aa28.06■■■□□ 2.08
ELL-204ENST00000596915 ABCA10Q8WWZ4 1543 aa28.04■■■□□ 2.08
ELL-204ENST00000596915 FBLN2P98095 1184 aa28.03■■■□□ 2.08
ELL-204ENST00000596915 GRIN2BQ13224 1484 aa28.02■■■□□ 2.08
ELL-204ENST00000596915 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
ELL-204ENST00000596915 MAGI1Q96QZ7 1491 aaPredicted RBP27.99■■■□□ 2.07
ELL-204ENST00000596915 RIMBP3CA6NJZ7 1639 aa27.98■■■□□ 2.07
ELL-204ENST00000596915 RIMBP3BA6NNM3 1639 aa27.98■■■□□ 2.07
ELL-204ENST00000596915 RIMBP3Q9UFD9 1639 aa27.98■■■□□ 2.07
ELL-204ENST00000596915 TRIM41Q8WV44 630 aa27.94■■■□□ 2.06
ELL-204ENST00000596915 SYNJ2O15056 1496 aa27.89■■■□□ 2.05
ELL-204ENST00000596915 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
ELL-204ENST00000596915 CHMP7Q8WUX9 453 aaPredicted RBP27.85■■■□□ 2.05
ELL-204ENST00000596915 ADAMTS12P58397 1594 aa27.82■■■□□ 2.04
ELL-204ENST00000596915 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
ELL-204ENST00000596915 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
ELL-204ENST00000596915 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
ELL-204ENST00000596915 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
ELL-204ENST00000596915 CEP170Q5SW79 1584 aa27.62■■■□□ 2.01
ELL-204ENST00000596915 ARAP1Q96P48 1450 aa27.62■■■□□ 2.01
ELL-204ENST00000596915 CYB5RLQ6IPT4 315 aa27.54■■■□□ 2
ELL-204ENST00000596915 CUL7Q14999 1698 aa27.53■■■□□ 2
ELL-204ENST00000596915 KIF27Q86VH2 1401 aa27.53■■■□□ 2
ELL-204ENST00000596915 NUP160Q12769 1436 aa27.51■■□□□ 1.99
ELL-204ENST00000596915 SHROOM2Q13796 1616 aa27.45■■□□□ 1.98
ELL-204ENST00000596915 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
ELL-204ENST00000596915 ERCC6L2Q5T890 1561 aa27.42■■□□□ 1.98
ELL-204ENST00000596915 IGF1RP08069 1367 aa27.35■■□□□ 1.97
ELL-204ENST00000596915 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms