RNA–Protein interactions for RNA: ENST00000569182.1

GGA2-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 4

Gene GGA2, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-214ENST00000569182 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
GGA2-214ENST00000569182 ABCC9O60706 1549 aa24.3■■□□□ 1.48
GGA2-214ENST00000569182 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
GGA2-214ENST00000569182 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
GGA2-214ENST00000569182 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.2
GGA2-214ENST00000569182 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
GGA2-214ENST00000569182 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.22e-6■□□□□ 9.6
GGA2-214ENST00000569182 NACADO15069 1562 aa22.14■■□□□ 1.13
GGA2-214ENST00000569182 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
GGA2-214ENST00000569182 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
GGA2-214ENST00000569182 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
GGA2-214ENST00000569182 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
GGA2-214ENST00000569182 CC2D2AQ9P2K1 1620 aa21.83■■□□□ 1.08
GGA2-214ENST00000569182 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
GGA2-214ENST00000569182 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
GGA2-214ENST00000569182 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
GGA2-214ENST00000569182 CUX2O14529 1486 aa21.3■■□□□ 1
GGA2-214ENST00000569182 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
GGA2-214ENST00000569182 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
GGA2-214ENST00000569182 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
GGA2-214ENST00000569182 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
GGA2-214ENST00000569182 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
GGA2-214ENST00000569182 NESP48681 1621 aa20.56■□□□□ 0.88
GGA2-214ENST00000569182 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
GGA2-214ENST00000569182 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
GGA2-214ENST00000569182 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
GGA2-214ENST00000569182 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
GGA2-214ENST00000569182 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
GGA2-214ENST00000569182 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
GGA2-214ENST00000569182 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
GGA2-214ENST00000569182 KIF21AQ7Z4S6 1674 aa20.19■□□□□ 0.82
GGA2-214ENST00000569182 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
GGA2-214ENST00000569182 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
GGA2-214ENST00000569182 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
GGA2-214ENST00000569182 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
GGA2-214ENST00000569182 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
GGA2-214ENST00000569182 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
GGA2-214ENST00000569182 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
GGA2-214ENST00000569182 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
GGA2-214ENST00000569182 MRC2Q9UBG0 1479 aa20.02■□□□□ 0.8
GGA2-214ENST00000569182 SMARCA4P51532 1647 aa19.97■□□□□ 0.79
GGA2-214ENST00000569182 WDR62O43379 1518 aa19.97■□□□□ 0.79
GGA2-214ENST00000569182 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
GGA2-214ENST00000569182 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
GGA2-214ENST00000569182 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
GGA2-214ENST00000569182 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
GGA2-214ENST00000569182 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
GGA2-214ENST00000569182 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
GGA2-214ENST00000569182 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
GGA2-214ENST00000569182 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
GGA2-214ENST00000569182 ILDR1Q86SU0 546 aaPredicted RBP19.53■□□□□ 0.72
GGA2-214ENST00000569182 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
GGA2-214ENST00000569182 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
GGA2-214ENST00000569182 FBLN2P98095 1184 aa19.38■□□□□ 0.69
GGA2-214ENST00000569182 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
GGA2-214ENST00000569182 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
GGA2-214ENST00000569182 CFTRP13569 1480 aa19.35■□□□□ 0.69
GGA2-214ENST00000569182 CHD1O14646 1710 aa19.31■□□□□ 0.68
GGA2-214ENST00000569182 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.67
GGA2-214ENST00000569182 WIZO95785 1651 aa19.24■□□□□ 0.67
GGA2-214ENST00000569182 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■■■■■ 30.3
GGA2-214ENST00000569182 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
GGA2-214ENST00000569182 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
GGA2-214ENST00000569182 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
GGA2-214ENST00000569182 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
GGA2-214ENST00000569182 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
GGA2-214ENST00000569182 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
GGA2-214ENST00000569182 PRDM2Q13029 1718 aa18.98■□□□□ 0.63
GGA2-214ENST00000569182 KDM4FA0A1W2PPD8 638 aa18.98■□□□□ 0.63
GGA2-214ENST00000569182 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
GGA2-214ENST00000569182 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
GGA2-214ENST00000569182 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
GGA2-214ENST00000569182 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
GGA2-214ENST00000569182 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
GGA2-214ENST00000569182 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
GGA2-214ENST00000569182 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
GGA2-214ENST00000569182 MAGI1Q96QZ7 1491 aaPredicted RBP18.8■□□□□ 0.6
GGA2-214ENST00000569182 SOGA1O94964 1423 aa18.8■□□□□ 0.6
GGA2-214ENST00000569182 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
GGA2-214ENST00000569182 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
GGA2-214ENST00000569182 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
GGA2-214ENST00000569182 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
GGA2-214ENST00000569182 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
GGA2-214ENST00000569182 GRIN2BQ13224 1484 aa18.72■□□□□ 0.59
GGA2-214ENST00000569182 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
GGA2-214ENST00000569182 KDM6BO15054 1643 aa18.65■□□□□ 0.58
GGA2-214ENST00000569182 FBXO41Q8TF61 875 aa18.65■□□□□ 0.58
GGA2-214ENST00000569182 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
GGA2-214ENST00000569182 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
GGA2-214ENST00000569182 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
GGA2-214ENST00000569182 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
GGA2-214ENST00000569182 ADGRL1O94910 1474 aa18.55■□□□□ 0.56
GGA2-214ENST00000569182 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
GGA2-214ENST00000569182 PBRM1Q86U86 1689 aa18.53■□□□□ 0.56
GGA2-214ENST00000569182 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
GGA2-214ENST00000569182 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
GGA2-214ENST00000569182 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
GGA2-214ENST00000569182 TSPOAP1O95153 1857 aa18.46■□□□□ 0.54
GGA2-214ENST00000569182 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
GGA2-214ENST00000569182 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms