Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ANKRD13C-201ENST00000262346 3327 ntTSL 1 (best) BASIC8.93□□□□□ -0.982e-6■■□□□ 13.9
PRPF8Q6P2Q9 AREL1-213ENST00000556327 910 ntTSL 48.91□□□□□ -0.982e-6■■□□□ 13.9
PRPF8Q6P2Q9 DYNLRB1-204ENST00000480759 1053 ntTSL 38.9□□□□□ -0.982e-6■■□□□ 13.9
PRPF8Q6P2Q9 NINJ1-205ENST00000490564 488 ntTSL 1 (best)8.87□□□□□ -0.993e-9■■□□□ 13.9
PRPF8Q6P2Q9 NAALAD2-207ENST00000527493 2061 ntTSL 58.87□□□□□ -0.992e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM101-208ENST00000592127 576 ntTSL 48.87□□□□□ -0.992e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-202ENST00000352410 5828 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.993e-8■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-207ENST00000490672 3264 ntTSL 28.83□□□□□ -12e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-215ENST00000372367 644 ntTSL 1 (best) BASIC8.81□□□□□ -12e-6■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-212ENST00000497707 392 ntTSL 58.81□□□□□ -12e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-229ENST00000528371 599 ntTSL 1 (best) BASIC8.81□□□□□ -12e-6■■□□□ 13.9
PRPF8Q6P2Q9 SIDT2-213ENST00000529484 833 ntTSL 38.8□□□□□ -13e-9■■□□□ 13.9
PRPF8Q6P2Q9 TNFAIP1-205ENST00000582302 579 ntTSL 58.74□□□□□ -1.012e-6■■□□□ 13.9
PRPF8Q6P2Q9 SLC35A5-205ENST00000484995 575 ntTSL 38.72□□□□□ -1.012e-6■■□□□ 13.9
PRPF8Q6P2Q9 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.012e-6■■□□□ 13.9
PRPF8Q6P2Q9 LPP-206ENST00000430340 521 ntTSL 38.65□□□□□ -1.032e-6■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-214ENST00000486716 594 ntTSL 28.63□□□□□ -1.036e-12■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-227ENST00000532783 580 ntTSL 48.63□□□□□ -1.036e-12■■□□□ 13.9
PRPF8Q6P2Q9 ZNF641-206ENST00000548932 575 ntTSL 58.59□□□□□ -1.036e-12■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-203ENST00000332628 1035 ntTSL 1 (best) BASIC8.59□□□□□ -1.032e-6■■□□□ 13.9
PRPF8Q6P2Q9 PPP2R5C-230ENST00000557714 536 ntTSL 4 BASIC8.49□□□□□ -1.052e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-231ENST00000530581 893 ntTSL 1 (best)8.47□□□□□ -1.052e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC8.45□□□□□ -1.063e-8■■□□□ 13.9
PRPF8Q6P2Q9 ITGB1BP2-201ENST00000373829 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.062e-6■■□□□ 13.9
PRPF8Q6P2Q9 NPM3-203ENST00000468544 393 ntTSL 58.42□□□□□ -1.062e-6■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-212ENST00000480531 649 ntTSL 38.42□□□□□ -1.066e-12■■□□□ 13.9
PRPF8Q6P2Q9 CNOT2-214ENST00000548741 536 ntTSL 48.38□□□□□ -1.072e-6■■□□□ 13.9
PRPF8Q6P2Q9 WDR91-207ENST00000479698 683 ntTSL 38.3□□□□□ -1.082e-6■■□□□ 13.9
PRPF8Q6P2Q9 GNL2-209ENST00000538069 698 ntTSL 38.22□□□□□ -1.092e-6■■□□□ 13.9
PRPF8Q6P2Q9 GINS3-201ENST00000318129 2274 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.112e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-234ENST00000531993 786 ntTSL 1 (best) BASIC8.1□□□□□ -1.112e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC8.09□□□□□ -1.112e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC8.03□□□□□ -1.122e-6■■□□□ 13.9
PRPF8Q6P2Q9 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.135e-6■■□□□ 13.9
PRPF8Q6P2Q9 GINS3-202ENST00000328514 1932 ntTSL 1 (best) BASIC7.99□□□□□ -1.132e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC7.97□□□□□ -1.132e-6■■□□□ 13.9
PRPF8Q6P2Q9 ENC1-204ENST00000509284 571 ntTSL 47.97□□□□□ -1.131e-15■■□□□ 13.9
PRPF8Q6P2Q9 MACF1-225ENST00000497807 2689 ntTSL 1 (best)7.97□□□□□ -1.132e-6■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-210ENST00000474868 540 ntTSL 37.95□□□□□ -1.146e-12■■□□□ 13.9
PRPF8Q6P2Q9 NRDC-212ENST00000497358 700 ntTSL 37.94□□□□□ -1.142e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-224ENST00000484868 318 ntTSL 37.93□□□□□ -1.142e-6■■□□□ 13.9
PRPF8Q6P2Q9 TTBK2-202ENST00000562880 556 ntTSL 47.91□□□□□ -1.143e-9■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-236ENST00000533212 781 ntTSL 1 (best)7.89□□□□□ -1.152e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC7.89□□□□□ -1.152e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-222ENST00000469715 1160 ntTSL 1 (best)7.89□□□□□ -1.152e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-227ENST00000490541 976 ntTSL 1 (best)7.89□□□□□ -1.152e-6■■□□□ 13.9
PRPF8Q6P2Q9 NFIA-213ENST00000493627 696 ntTSL 1 (best)7.86□□□□□ -1.152e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC7.81□□□□□ -1.162e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-238ENST00000533997 1007 ntTSL 1 (best)7.8□□□□□ -1.162e-6■■□□□ 13.9
PRPF8Q6P2Q9 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.172e-6■■□□□ 13.9
PRPF8Q6P2Q9 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.172e-6■■□□□ 13.9
PRPF8Q6P2Q9 CNOT2-229ENST00000551179 355 ntTSL 27.7□□□□□ -1.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 CNOT2-243ENST00000553078 440 ntTSL 37.7□□□□□ -1.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 LPP-209ENST00000454789 343 ntTSL 57.68□□□□□ -1.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 ITGB1BP2-205ENST00000538820 1439 ntTSL 1 (best) BASIC7.64□□□□□ -1.192e-6■■□□□ 13.9
PRPF8Q6P2Q9 ITGB1BP2-204ENST00000483897 480 ntTSL 37.6□□□□□ -1.192e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC7.53□□□□□ -1.26e-12■■□□□ 13.9
PRPF8Q6P2Q9 DHX38-209ENST00000566794 710 ntTSL 47.5□□□□□ -1.212e-6■■□□□ 13.9
PRPF8Q6P2Q9 SON-217ENST00000478183 1818 ntTSL 1 (best)7.49□□□□□ -1.212e-6■■□□□ 13.9
PRPF8Q6P2Q9 KAT7-205ENST00000503101 875 ntTSL 37.47□□□□□ -1.212e-6■■□□□ 13.9
PRPF8Q6P2Q9 WDR11-206ENST00000603658 582 ntTSL 37.47□□□□□ -1.212e-6■■□□□ 13.9
PRPF8Q6P2Q9 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC7.45□□□□□ -1.222e-6■■□□□ 13.9
PRPF8Q6P2Q9 CHMP2B-203ENST00000471660 2528 ntTSL 2 BASIC7.45□□□□□ -1.222e-6■■□□□ 13.9
PRPF8Q6P2Q9 GLS2-214ENST00000496006 566 ntTSL 47.41□□□□□ -1.225e-6■■□□□ 13.9
PRPF8Q6P2Q9 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.232e-6■■□□□ 13.9
PRPF8Q6P2Q9 STK36-213ENST00000473681 546 ntTSL 57.38□□□□□ -1.233e-13■■□□□ 13.9
PRPF8Q6P2Q9 ZNF641-209ENST00000550181 555 ntTSL 37.38□□□□□ -1.236e-12■■□□□ 13.9
PRPF8Q6P2Q9 SCYL3-204ENST00000423670 2077 ntTSL 57.2□□□□□ -1.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 LPP-203ENST00000416784 612 ntTSL 37.18□□□□□ -1.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 PEX1-210ENST00000496420 5333 ntTSL 27.09□□□□□ -1.272e-6■■□□□ 13.9
PRPF8Q6P2Q9 PRR3-203ENST00000470703 3429 ntTSL 27.07□□□□□ -1.282e-6■■□□□ 13.9
PRPF8Q6P2Q9 SUPT4H1-206ENST00000581204 539 ntTSL 27.04□□□□□ -1.283e-13■■□□□ 13.9
PRPF8Q6P2Q9 PON3-207ENST00000460248 582 ntTSL 27□□□□□ -1.292e-6■■□□□ 13.9
PRPF8Q6P2Q9 HUWE1-213ENST00000489876 754 ntTSL 47□□□□□ -1.292e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZFYVE16-204ENST00000509558 637 ntTSL 37□□□□□ -1.292e-6■■□□□ 13.9
PRPF8Q6P2Q9 AP002495.1-206ENST00000533047 564 ntTSL 36.98□□□□□ -1.292e-6■■□□□ 13.9
PRPF8Q6P2Q9 SMPD2-202ENST00000439615 482 ntTSL 36.94□□□□□ -1.36e-12■■□□□ 13.9
PRPF8Q6P2Q9 RPA1-207ENST00000574049 3849 ntTSL 56.93□□□□□ -1.32e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZNF641-207ENST00000549125 290 ntTSL 56.88□□□□□ -1.316e-12■■□□□ 13.9
PRPF8Q6P2Q9 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC6.87□□□□□ -1.312e-6■■□□□ 13.9
PRPF8Q6P2Q9 NCOA6-204ENST00000471897 858 ntTSL 26.84□□□□□ -1.313e-9■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC6.81□□□□□ -1.322e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC6.79□□□□□ -1.322e-6■■□□□ 13.9
PRPF8Q6P2Q9 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.322e-6■■□□□ 13.9
PRPF8Q6P2Q9 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC6.62□□□□□ -1.352e-6■■□□□ 13.9
PRPF8Q6P2Q9 NFYC-222ENST00000530965 293 ntTSL 56.58□□□□□ -1.362e-6■■□□□ 13.9
PRPF8Q6P2Q9 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.56□□□□□ -1.362e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC6.55□□□□□ -1.363e-8■■□□□ 13.9
PRPF8Q6P2Q9 SRPK2-210ENST00000477925 1336 ntTSL 56.48□□□□□ -1.372e-6■■□□□ 13.9
PRPF8Q6P2Q9 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.45□□□□□ -1.383e-13■■□□□ 13.9
PRPF8Q6P2Q9 PLPP5-207ENST00000527793 392 ntTSL 36.4□□□□□ -1.383e-9■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC6.38□□□□□ -1.396e-12■■□□□ 13.9
PRPF8Q6P2Q9 SLC2A3-202ENST00000469295 1030 ntTSL 26.38□□□□□ -1.392e-6■■□□□ 13.9
PRPF8Q6P2Q9 SPTLC2-206ENST00000557566 510 ntTSL 26.34□□□□□ -1.392e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-215ENST00000576827 583 ntTSL 36.27□□□□□ -1.416e-12■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-235ENST00000532911 700 ntTSL 56.24□□□□□ -1.412e-6■■□□□ 13.9
PRPF8Q6P2Q9 STK36-206ENST00000424080 878 ntTSL 56.22□□□□□ -1.411e-15■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD13C-205ENST00000498735 530 ntTSL 56.19□□□□□ -1.422e-6■■□□□ 13.9
PRPF8Q6P2Q9 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.16□□□□□ -1.422e-6■■□□□ 13.9
Retrieved 100 of 73,762 protein–RNA pairs in 1500.4 ms