RNA–Protein interactions for RNA: ENST00000367772.8

SCYL3-203, Transcript of SCY1 like pseudokinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCYL3, Length 3,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-203ENST00000367772 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
SCYL3-203ENST00000367772 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
SCYL3-203ENST00000367772 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
SCYL3-203ENST00000367772 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
SCYL3-203ENST00000367772 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
SCYL3-203ENST00000367772 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
SCYL3-203ENST00000367772 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
SCYL3-203ENST00000367772 PCGF6Q9BYE7 350 aa15.63■□□□□ 0.09
SCYL3-203ENST00000367772 CCDC180Q9P1Z9 1646 aa15.62■□□□□ 0.09
SCYL3-203ENST00000367772 HRCP23327 699 aa15.56■□□□□ 0.08
SCYL3-203ENST00000367772 LOC105371045A0A1W2PR82 267 aa15.45■□□□□ 0.06
SCYL3-203ENST00000367772 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
SCYL3-203ENST00000367772 ABCC9O60706 1549 aa15.41■□□□□ 0.06
SCYL3-203ENST00000367772 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
SCYL3-203ENST00000367772 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
SCYL3-203ENST00000367772 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
SCYL3-203ENST00000367772 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
SCYL3-203ENST00000367772 TRIM41Q8WV44 630 aa15.04■□□□□ -0
SCYL3-203ENST00000367772 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
SCYL3-203ENST00000367772 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
SCYL3-203ENST00000367772 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
SCYL3-203ENST00000367772 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
SCYL3-203ENST00000367772 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
SCYL3-203ENST00000367772 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
SCYL3-203ENST00000367772 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
SCYL3-203ENST00000367772 NACADO15069 1562 aa14.65□□□□□ -0.06
SCYL3-203ENST00000367772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
SCYL3-203ENST00000367772 CCER1Q8TC90 406 aaPredicted RBP14.58□□□□□ -0.07
SCYL3-203ENST00000367772 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
SCYL3-203ENST00000367772 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
SCYL3-203ENST00000367772 WIZO95785 1651 aa14.48□□□□□ -0.09
SCYL3-203ENST00000367772 UBTFP17480 764 aaKnown RBP14.38□□□□□ -0.11
SCYL3-203ENST00000367772 UNC13AQ9UPW8 1703 aa14.36□□□□□ -0.11
SCYL3-203ENST00000367772 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
SCYL3-203ENST00000367772 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
SCYL3-203ENST00000367772 NEUROD1Q13562 356 aa14.33□□□□□ -0.12
SCYL3-203ENST00000367772 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
SCYL3-203ENST00000367772 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
SCYL3-203ENST00000367772 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
SCYL3-203ENST00000367772 RANGAP1P46060 587 aaPredicted RBP14.28□□□□□ -0.12
SCYL3-203ENST00000367772 SOGA1O94964 1423 aa14.27□□□□□ -0.13
SCYL3-203ENST00000367772 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
SCYL3-203ENST00000367772 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
SCYL3-203ENST00000367772 CEP162Q5TB80 1403 aa14.25□□□□□ -0.13
SCYL3-203ENST00000367772 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
SCYL3-203ENST00000367772 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
SCYL3-203ENST00000367772 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
SCYL3-203ENST00000367772 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
SCYL3-203ENST00000367772 CENPBP07199 599 aaPredicted RBP14.21□□□□□ -0.13
SCYL3-203ENST00000367772 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
SCYL3-203ENST00000367772 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
SCYL3-203ENST00000367772 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
SCYL3-203ENST00000367772 TNIKQ9UKE5 1360 aa14.13□□□□□ -0.15
SCYL3-203ENST00000367772 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
SCYL3-203ENST00000367772 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
SCYL3-203ENST00000367772 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
SCYL3-203ENST00000367772 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
SCYL3-203ENST00000367772 APLP2Q06481 763 aa14.08□□□□□ -0.16
SCYL3-203ENST00000367772 GOLGA3Q08378 1498 aa14.02□□□□□ -0.16
SCYL3-203ENST00000367772 MIER1Q8N108 512 aa14.02□□□□□ -0.17
SCYL3-203ENST00000367772 EEA1Q15075 1411 aa13.99□□□□□ -0.17
SCYL3-203ENST00000367772 CLIP1P30622 1438 aa13.96□□□□□ -0.17
SCYL3-203ENST00000367772 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
SCYL3-203ENST00000367772 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
SCYL3-203ENST00000367772 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
SCYL3-203ENST00000367772 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
SCYL3-203ENST00000367772 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
SCYL3-203ENST00000367772 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
SCYL3-203ENST00000367772 ITGAEP38570 1179 aa13.86□□□□□ -0.19
SCYL3-203ENST00000367772 VPS8Q8N3P4 1428 aa13.85□□□□□ -0.19
SCYL3-203ENST00000367772 KANK4Q5T7N3 995 aaPredicted RBP13.79□□□□□ -0.2
SCYL3-203ENST00000367772 KIF21BO75037 1637 aa13.75□□□□□ -0.21
SCYL3-203ENST00000367772 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
SCYL3-203ENST00000367772 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
SCYL3-203ENST00000367772 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
SCYL3-203ENST00000367772 ATP1B4Q9UN42 357 aaPredicted RBP13.66□□□□□ -0.22
SCYL3-203ENST00000367772 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
SCYL3-203ENST00000367772 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
SCYL3-203ENST00000367772 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
SCYL3-203ENST00000367772 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
SCYL3-203ENST00000367772 TOP2BQ02880 1626 aa13.59□□□□□ -0.23
SCYL3-203ENST00000367772 SUPT16HQ9Y5B9 1047 aaKnown RBP13.58□□□□□ -0.23
SCYL3-203ENST00000367772 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
SCYL3-203ENST00000367772 CLSPNQ9HAW4 1339 aa13.58□□□□□ -0.24
SCYL3-203ENST00000367772 NESP48681 1621 aa13.58□□□□□ -0.24
SCYL3-203ENST00000367772 BCANQ96GW7 911 aa13.57□□□□□ -0.24
SCYL3-203ENST00000367772 PRXQ9BXM0 1461 aa13.57□□□□□ -0.24
SCYL3-203ENST00000367772 CCNB3Q8WWL7 1395 aa13.56□□□□□ -0.24
SCYL3-203ENST00000367772 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
SCYL3-203ENST00000367772 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
SCYL3-203ENST00000367772 MYT1Q01538 1121 aa13.55□□□□□ -0.24
SCYL3-203ENST00000367772 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
SCYL3-203ENST00000367772 DDX10Q13206 875 aaKnown RBP13.53□□□□□ -0.24
SCYL3-203ENST00000367772 CUX1P39880 1505 aa13.51□□□□□ -0.25
SCYL3-203ENST00000367772 HMGXB3Q12766 1538 aa13.51□□□□□ -0.25
SCYL3-203ENST00000367772 RAB3GAP2Q9H2M9 1393 aa13.5□□□□□ -0.25
SCYL3-203ENST00000367772 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
SCYL3-203ENST00000367772 RRBP1Q9P2E9 1410 aaKnown RBP13.49□□□□□ -0.25
SCYL3-203ENST00000367772 ARHGAP35Q9NRY4 1499 aa13.49□□□□□ -0.25
SCYL3-203ENST00000367772 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms