RNA–Protein interactions for RNA: ENST00000439615.1

SMPD2-202, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

TSL 3

Gene SMPD2, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-202ENST00000439615 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
SMPD2-202ENST00000439615 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
SMPD2-202ENST00000439615 ABCC9O60706 1549 aa17.88■□□□□ 0.45
SMPD2-202ENST00000439615 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
SMPD2-202ENST00000439615 NACADO15069 1562 aa17.07■□□□□ 0.32
SMPD2-202ENST00000439615 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
SMPD2-202ENST00000439615 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
SMPD2-202ENST00000439615 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
SMPD2-202ENST00000439615 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
SMPD2-202ENST00000439615 DCAF8L2P0C7V8 631 aa16.68■□□□□ 0.26
SMPD2-202ENST00000439615 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
SMPD2-202ENST00000439615 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
SMPD2-202ENST00000439615 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
SMPD2-202ENST00000439615 SHROOM4Q9ULL8 1493 aa16.52■□□□□ 0.23
SMPD2-202ENST00000439615 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
SMPD2-202ENST00000439615 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
SMPD2-202ENST00000439615 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
SMPD2-202ENST00000439615 CECR2Q9BXF3 1484 aa16.13■□□□□ 0.17
SMPD2-202ENST00000439615 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
SMPD2-202ENST00000439615 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
SMPD2-202ENST00000439615 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
SMPD2-202ENST00000439615 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
SMPD2-202ENST00000439615 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
SMPD2-202ENST00000439615 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
SMPD2-202ENST00000439615 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
SMPD2-202ENST00000439615 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.07
SMPD2-202ENST00000439615 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
SMPD2-202ENST00000439615 CUX2O14529 1486 aa15.47■□□□□ 0.07
SMPD2-202ENST00000439615 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
SMPD2-202ENST00000439615 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
SMPD2-202ENST00000439615 NESP48681 1621 aa15.4■□□□□ 0.06
SMPD2-202ENST00000439615 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
SMPD2-202ENST00000439615 WIZO95785 1651 aa15.34■□□□□ 0.05
SMPD2-202ENST00000439615 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
SMPD2-202ENST00000439615 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
SMPD2-202ENST00000439615 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
SMPD2-202ENST00000439615 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
SMPD2-202ENST00000439615 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
SMPD2-202ENST00000439615 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
SMPD2-202ENST00000439615 WDR62O43379 1518 aa15.14■□□□□ 0.01
SMPD2-202ENST00000439615 PRDM2Q13029 1718 aa15.13■□□□□ 0.01
SMPD2-202ENST00000439615 MRC2Q9UBG0 1479 aa15.13■□□□□ 0.01
SMPD2-202ENST00000439615 CEP164Q9UPV0 1460 aa15.08■□□□□ 0.01
SMPD2-202ENST00000439615 CFTRP13569 1480 aa15.08■□□□□ 0
SMPD2-202ENST00000439615 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
SMPD2-202ENST00000439615 URB2Q14146 1524 aaKnown RBP14.93□□□□□ -0.02
SMPD2-202ENST00000439615 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
SMPD2-202ENST00000439615 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
SMPD2-202ENST00000439615 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
SMPD2-202ENST00000439615 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
SMPD2-202ENST00000439615 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
SMPD2-202ENST00000439615 EIF4G3O43432 1585 aaKnown RBP14.73□□□□□ -0.05
SMPD2-202ENST00000439615 TARBP1Q13395 1621 aaKnown RBP14.7□□□□□ -0.06
SMPD2-202ENST00000439615 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
SMPD2-202ENST00000439615 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
SMPD2-202ENST00000439615 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
SMPD2-202ENST00000439615 CHD1O14646 1710 aa14.63□□□□□ -0.07
SMPD2-202ENST00000439615 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
SMPD2-202ENST00000439615 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
SMPD2-202ENST00000439615 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
SMPD2-202ENST00000439615 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
SMPD2-202ENST00000439615 CUX1P39880 1505 aa14.56□□□□□ -0.08
SMPD2-202ENST00000439615 FGD5Q6ZNL6 1462 aa14.56□□□□□ -0.08
SMPD2-202ENST00000439615 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.082e-6■■■■□ 22.5
SMPD2-202ENST00000439615 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
SMPD2-202ENST00000439615 ARHGEF11O15085 1522 aa14.52□□□□□ -0.08
SMPD2-202ENST00000439615 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
SMPD2-202ENST00000439615 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
SMPD2-202ENST00000439615 SOGA1O94964 1423 aa14.49□□□□□ -0.09
SMPD2-202ENST00000439615 SNAPC4Q5SXM2 1469 aa14.46□□□□□ -0.09
SMPD2-202ENST00000439615 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
SMPD2-202ENST00000439615 ABCA5Q8WWZ7 1642 aa14.45□□□□□ -0.1
SMPD2-202ENST00000439615 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
SMPD2-202ENST00000439615 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
SMPD2-202ENST00000439615 TDRD9Q8NDG6 1382 aaKnown RBP14.43□□□□□ -0.1
SMPD2-202ENST00000439615 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
SMPD2-202ENST00000439615 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
SMPD2-202ENST00000439615 ABCA10Q8WWZ4 1543 aa14.41□□□□□ -0.1
SMPD2-202ENST00000439615 TOP2BQ02880 1626 aa14.4□□□□□ -0.1
SMPD2-202ENST00000439615 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
SMPD2-202ENST00000439615 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
SMPD2-202ENST00000439615 SUPT5HO00267 1087 aaKnown RBP14.37□□□□□ -0.11
SMPD2-202ENST00000439615 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
SMPD2-202ENST00000439615 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
SMPD2-202ENST00000439615 FBLN2P98095 1184 aa14.32□□□□□ -0.12
SMPD2-202ENST00000439615 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
SMPD2-202ENST00000439615 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
SMPD2-202ENST00000439615 GRIN2AQ12879 1464 aa14.26□□□□□ -0.13
SMPD2-202ENST00000439615 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
SMPD2-202ENST00000439615 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
SMPD2-202ENST00000439615 CYB5RLQ6IPT4 315 aa14.23□□□□□ -0.13
SMPD2-202ENST00000439615 NUP160Q12769 1436 aa14.22□□□□□ -0.13
SMPD2-202ENST00000439615 SHROOM2Q13796 1616 aa14.22□□□□□ -0.13
SMPD2-202ENST00000439615 FHAD1B1AJZ9 1412 aa14.19□□□□□ -0.14
SMPD2-202ENST00000439615 ERCC6L2Q5T890 1561 aa14.16□□□□□ -0.14
SMPD2-202ENST00000439615 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
SMPD2-202ENST00000439615 CUL7Q14999 1698 aa14.11□□□□□ -0.15
SMPD2-202ENST00000439615 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
SMPD2-202ENST00000439615 KIF27Q86VH2 1401 aa14.02□□□□□ -0.16
SMPD2-202ENST00000439615 PRG4Q92954 1404 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms