RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
COMMD6-212ENST00000497707 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
COMMD6-212ENST00000497707 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
COMMD6-212ENST00000497707 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
COMMD6-212ENST00000497707 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
COMMD6-212ENST00000497707 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
COMMD6-212ENST00000497707 ABCC9O60706 1549 aa21.23■□□□□ 0.99
COMMD6-212ENST00000497707 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
COMMD6-212ENST00000497707 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
COMMD6-212ENST00000497707 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
COMMD6-212ENST00000497707 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
COMMD6-212ENST00000497707 NACADO15069 1562 aa20.77■□□□□ 0.92
COMMD6-212ENST00000497707 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
COMMD6-212ENST00000497707 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
COMMD6-212ENST00000497707 SCRIBQ14160 1630 aa20.43■□□□□ 0.86
COMMD6-212ENST00000497707 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
COMMD6-212ENST00000497707 BICRAQ9NZM4 1560 aa20.11■□□□□ 0.81
COMMD6-212ENST00000497707 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
COMMD6-212ENST00000497707 FOXD1Q16676 465 aa19.94■□□□□ 0.78
COMMD6-212ENST00000497707 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
COMMD6-212ENST00000497707 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
COMMD6-212ENST00000497707 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
COMMD6-212ENST00000497707 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
COMMD6-212ENST00000497707 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
COMMD6-212ENST00000497707 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
COMMD6-212ENST00000497707 WIZO95785 1651 aa19.52■□□□□ 0.71
COMMD6-212ENST00000497707 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
COMMD6-212ENST00000497707 PEG3Q9GZU2 1588 aa19.38■□□□□ 0.69
COMMD6-212ENST00000497707 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
COMMD6-212ENST00000497707 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
COMMD6-212ENST00000497707 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
COMMD6-212ENST00000497707 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
COMMD6-212ENST00000497707 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
COMMD6-212ENST00000497707 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
COMMD6-212ENST00000497707 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
COMMD6-212ENST00000497707 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
COMMD6-212ENST00000497707 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
COMMD6-212ENST00000497707 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
COMMD6-212ENST00000497707 MSH5O43196 834 aa18.73■□□□□ 0.59
COMMD6-212ENST00000497707 CFTRP13569 1480 aa18.72■□□□□ 0.59
COMMD6-212ENST00000497707 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
COMMD6-212ENST00000497707 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
COMMD6-212ENST00000497707 NESP48681 1621 aa18.63■□□□□ 0.57
COMMD6-212ENST00000497707 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
COMMD6-212ENST00000497707 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
COMMD6-212ENST00000497707 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
COMMD6-212ENST00000497707 PPP6R1Q9UPN7 881 aa18.54■□□□□ 0.56
COMMD6-212ENST00000497707 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
COMMD6-212ENST00000497707 ADRA2BP18089 450 aa18.5■□□□□ 0.55
COMMD6-212ENST00000497707 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
COMMD6-212ENST00000497707 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
COMMD6-212ENST00000497707 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.54
COMMD6-212ENST00000497707 CUX1P39880 1505 aa18.42■□□□□ 0.54
COMMD6-212ENST00000497707 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
COMMD6-212ENST00000497707 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
COMMD6-212ENST00000497707 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
COMMD6-212ENST00000497707 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
COMMD6-212ENST00000497707 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
COMMD6-212ENST00000497707 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
COMMD6-212ENST00000497707 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
COMMD6-212ENST00000497707 SOGA1O94964 1423 aa18.27■□□□□ 0.52
COMMD6-212ENST00000497707 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
COMMD6-212ENST00000497707 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
COMMD6-212ENST00000497707 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
COMMD6-212ENST00000497707 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
COMMD6-212ENST00000497707 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
COMMD6-212ENST00000497707 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
COMMD6-212ENST00000497707 MRC2Q9UBG0 1479 aa18.17■□□□□ 0.5
COMMD6-212ENST00000497707 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
COMMD6-212ENST00000497707 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.49
COMMD6-212ENST00000497707 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
COMMD6-212ENST00000497707 THOC2Q8NI27 1593 aaKnown RBP18.11■□□□□ 0.49
COMMD6-212ENST00000497707 WDR62O43379 1518 aa18.1■□□□□ 0.49
COMMD6-212ENST00000497707 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
COMMD6-212ENST00000497707 EEA1Q15075 1411 aa18.09■□□□□ 0.49
COMMD6-212ENST00000497707 CUX2O14529 1486 aa18.06■□□□□ 0.48
COMMD6-212ENST00000497707 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
COMMD6-212ENST00000497707 TARBP1Q13395 1621 aaKnown RBP18.03■□□□□ 0.48
COMMD6-212ENST00000497707 KIF27Q86VH2 1401 aa18.02■□□□□ 0.48
COMMD6-212ENST00000497707 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
COMMD6-212ENST00000497707 IGF1RP08069 1367 aa17.99■□□□□ 0.47
COMMD6-212ENST00000497707 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
COMMD6-212ENST00000497707 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
COMMD6-212ENST00000497707 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
COMMD6-212ENST00000497707 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
COMMD6-212ENST00000497707 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
COMMD6-212ENST00000497707 KIF21BO75037 1637 aa17.9■□□□□ 0.46
COMMD6-212ENST00000497707 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
COMMD6-212ENST00000497707 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
COMMD6-212ENST00000497707 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
COMMD6-212ENST00000497707 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
COMMD6-212ENST00000497707 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
COMMD6-212ENST00000497707 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
COMMD6-212ENST00000497707 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
COMMD6-212ENST00000497707 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
COMMD6-212ENST00000497707 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
COMMD6-212ENST00000497707 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
COMMD6-212ENST00000497707 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
COMMD6-212ENST00000497707 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
COMMD6-212ENST00000497707 CUL7Q14999 1698 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms