RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
HUWE1-213ENST00000489876 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
HUWE1-213ENST00000489876 SENP3Q9H4L4 574 aaPredicted RBP24.39■■□□□ 1.49
HUWE1-213ENST00000489876 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
HUWE1-213ENST00000489876 FOXD1Q16676 465 aa22.85■■□□□ 1.25
HUWE1-213ENST00000489876 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
HUWE1-213ENST00000489876 PPP6R1Q9UPN7 881 aa21.56■■□□□ 1.04
HUWE1-213ENST00000489876 ADRA2BP18089 450 aa21.47■■□□□ 1.03
HUWE1-213ENST00000489876 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
HUWE1-213ENST00000489876 MSH5O43196 834 aa21.15■□□□□ 0.98
HUWE1-213ENST00000489876 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
HUWE1-213ENST00000489876 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
HUWE1-213ENST00000489876 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
HUWE1-213ENST00000489876 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
HUWE1-213ENST00000489876 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
HUWE1-213ENST00000489876 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
HUWE1-213ENST00000489876 CNKSR2Q8WXI2 1034 aa18.83■□□□□ 0.6
HUWE1-213ENST00000489876 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
HUWE1-213ENST00000489876 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
HUWE1-213ENST00000489876 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
HUWE1-213ENST00000489876 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
HUWE1-213ENST00000489876 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
HUWE1-213ENST00000489876 KCNA4P22459 653 aa18.19■□□□□ 0.5
HUWE1-213ENST00000489876 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
HUWE1-213ENST00000489876 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
HUWE1-213ENST00000489876 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
HUWE1-213ENST00000489876 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
HUWE1-213ENST00000489876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
HUWE1-213ENST00000489876 ABCC9O60706 1549 aa17.83■□□□□ 0.45
HUWE1-213ENST00000489876 C1QBPQ07021 282 aaKnown RBP17.82■□□□□ 0.44
HUWE1-213ENST00000489876 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
HUWE1-213ENST00000489876 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
HUWE1-213ENST00000489876 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
HUWE1-213ENST00000489876 CAPN15O75808 1086 aa17.16■□□□□ 0.34
HUWE1-213ENST00000489876 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
HUWE1-213ENST00000489876 DSG3P32926 999 aa17.08■□□□□ 0.32
HUWE1-213ENST00000489876 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
HUWE1-213ENST00000489876 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
HUWE1-213ENST00000489876 DCAF8L2P0C7V8 631 aa16.94■□□□□ 0.3
HUWE1-213ENST00000489876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
HUWE1-213ENST00000489876 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
HUWE1-213ENST00000489876 NACADO15069 1562 aa16.89■□□□□ 0.29
HUWE1-213ENST00000489876 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
HUWE1-213ENST00000489876 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
HUWE1-213ENST00000489876 ABCB7O75027 752 aa16.87■□□□□ 0.29
HUWE1-213ENST00000489876 APLP2Q06481 763 aa16.83■□□□□ 0.28
HUWE1-213ENST00000489876 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
HUWE1-213ENST00000489876 ZBTB22O15209 634 aa16.81■□□□□ 0.28
HUWE1-213ENST00000489876 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
HUWE1-213ENST00000489876 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
HUWE1-213ENST00000489876 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.28
HUWE1-213ENST00000489876 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
HUWE1-213ENST00000489876 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
HUWE1-213ENST00000489876 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
HUWE1-213ENST00000489876 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
HUWE1-213ENST00000489876 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
HUWE1-213ENST00000489876 POLA2Q14181 598 aa16.54■□□□□ 0.24
HUWE1-213ENST00000489876 SCRIBQ14160 1630 aa16.51■□□□□ 0.23
HUWE1-213ENST00000489876 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
HUWE1-213ENST00000489876 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
HUWE1-213ENST00000489876 SHROOM4Q9ULL8 1493 aa16.13■□□□□ 0.17
HUWE1-213ENST00000489876 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
HUWE1-213ENST00000489876 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
HUWE1-213ENST00000489876 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
HUWE1-213ENST00000489876 POTEHQ6S545 545 aa16.08■□□□□ 0.16
HUWE1-213ENST00000489876 ZBTB12Q9Y330 459 aaPredicted RBP16.05■□□□□ 0.16
HUWE1-213ENST00000489876 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
HUWE1-213ENST00000489876 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
HUWE1-213ENST00000489876 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
HUWE1-213ENST00000489876 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
HUWE1-213ENST00000489876 AKT1S1Q96B36 256 aa15.86■□□□□ 0.13
HUWE1-213ENST00000489876 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
HUWE1-213ENST00000489876 REM2Q8IYK8 340 aaPredicted RBP15.79■□□□□ 0.12
HUWE1-213ENST00000489876 FBLN2P98095 1184 aa15.77■□□□□ 0.12
HUWE1-213ENST00000489876 SMARCA4P51532 1647 aa15.72■□□□□ 0.11
HUWE1-213ENST00000489876 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
HUWE1-213ENST00000489876 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
HUWE1-213ENST00000489876 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
HUWE1-213ENST00000489876 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
HUWE1-213ENST00000489876 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
HUWE1-213ENST00000489876 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
HUWE1-213ENST00000489876 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
HUWE1-213ENST00000489876 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
HUWE1-213ENST00000489876 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
HUWE1-213ENST00000489876 PIP4P2Q8N4L2 257 aa15.54■□□□□ 0.08
HUWE1-213ENST00000489876 SSUH2Q9Y2M2 353 aa15.53■□□□□ 0.08
HUWE1-213ENST00000489876 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
HUWE1-213ENST00000489876 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
HUWE1-213ENST00000489876 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
HUWE1-213ENST00000489876 WIZO95785 1651 aa15.49■□□□□ 0.07
HUWE1-213ENST00000489876 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
HUWE1-213ENST00000489876 NESP48681 1621 aa15.44■□□□□ 0.06
HUWE1-213ENST00000489876 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■■■□□ 16.5
HUWE1-213ENST00000489876 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
HUWE1-213ENST00000489876 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
HUWE1-213ENST00000489876 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.04
HUWE1-213ENST00000489876 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
HUWE1-213ENST00000489876 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
HUWE1-213ENST00000489876 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
HUWE1-213ENST00000489876 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms