RNA–Protein interactions for RNA: ENST00000509558.1

ZFYVE16-204, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-204ENST00000509558 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
ZFYVE16-204ENST00000509558 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
ZFYVE16-204ENST00000509558 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
ZFYVE16-204ENST00000509558 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
ZFYVE16-204ENST00000509558 ABCC9O60706 1549 aa16.74■□□□□ 0.27
ZFYVE16-204ENST00000509558 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
ZFYVE16-204ENST00000509558 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
ZFYVE16-204ENST00000509558 NACADO15069 1562 aa16.5■□□□□ 0.23
ZFYVE16-204ENST00000509558 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
ZFYVE16-204ENST00000509558 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
ZFYVE16-204ENST00000509558 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
ZFYVE16-204ENST00000509558 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.17
ZFYVE16-204ENST00000509558 BICRAQ9NZM4 1560 aa15.92■□□□□ 0.14
ZFYVE16-204ENST00000509558 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
ZFYVE16-204ENST00000509558 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
ZFYVE16-204ENST00000509558 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
ZFYVE16-204ENST00000509558 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
ZFYVE16-204ENST00000509558 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
ZFYVE16-204ENST00000509558 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
ZFYVE16-204ENST00000509558 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
ZFYVE16-204ENST00000509558 WIZO95785 1651 aa15.54■□□□□ 0.08
ZFYVE16-204ENST00000509558 AEBP2Q6ZN18 517 aaPredicted RBP15.5■□□□□ 0.07
ZFYVE16-204ENST00000509558 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
ZFYVE16-204ENST00000509558 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
ZFYVE16-204ENST00000509558 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
ZFYVE16-204ENST00000509558 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
ZFYVE16-204ENST00000509558 SMARCA2P51531 1590 aa15.33■□□□□ 0.05
ZFYVE16-204ENST00000509558 HMGXB3Q12766 1538 aa15.23■□□□□ 0.03
ZFYVE16-204ENST00000509558 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
ZFYVE16-204ENST00000509558 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
ZFYVE16-204ENST00000509558 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
ZFYVE16-204ENST00000509558 CC2D2AQ9P2K1 1620 aa15.18■□□□□ 0.02
ZFYVE16-204ENST00000509558 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
ZFYVE16-204ENST00000509558 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
ZFYVE16-204ENST00000509558 CFTRP13569 1480 aa14.87□□□□□ -0.03
ZFYVE16-204ENST00000509558 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
ZFYVE16-204ENST00000509558 TRIM41Q8WV44 630 aa14.79□□□□□ -0.04
ZFYVE16-204ENST00000509558 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
ZFYVE16-204ENST00000509558 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
ZFYVE16-204ENST00000509558 SYNJ1O43426 1573 aa14.76□□□□□ -0.05
ZFYVE16-204ENST00000509558 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
ZFYVE16-204ENST00000509558 LAMC3Q9Y6N6 1575 aa14.72□□□□□ -0.05
ZFYVE16-204ENST00000509558 NESP48681 1621 aa14.7□□□□□ -0.06
ZFYVE16-204ENST00000509558 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
ZFYVE16-204ENST00000509558 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
ZFYVE16-204ENST00000509558 CUX1P39880 1505 aa14.66□□□□□ -0.06
ZFYVE16-204ENST00000509558 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
ZFYVE16-204ENST00000509558 SOGA1O94964 1423 aa14.57□□□□□ -0.08
ZFYVE16-204ENST00000509558 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
ZFYVE16-204ENST00000509558 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
ZFYVE16-204ENST00000509558 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
ZFYVE16-204ENST00000509558 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
ZFYVE16-204ENST00000509558 RUSC2Q8N2Y8 1516 aa14.53□□□□□ -0.08
ZFYVE16-204ENST00000509558 EEA1Q15075 1411 aa14.52□□□□□ -0.08
ZFYVE16-204ENST00000509558 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
ZFYVE16-204ENST00000509558 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
ZFYVE16-204ENST00000509558 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
ZFYVE16-204ENST00000509558 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
ZFYVE16-204ENST00000509558 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
ZFYVE16-204ENST00000509558 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
ZFYVE16-204ENST00000509558 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
ZFYVE16-204ENST00000509558 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
ZFYVE16-204ENST00000509558 KIF21BO75037 1637 aa14.39□□□□□ -0.11
ZFYVE16-204ENST00000509558 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
ZFYVE16-204ENST00000509558 WDR62O43379 1518 aa14.37□□□□□ -0.11
ZFYVE16-204ENST00000509558 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
ZFYVE16-204ENST00000509558 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
ZFYVE16-204ENST00000509558 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
ZFYVE16-204ENST00000509558 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
ZFYVE16-204ENST00000509558 CUX2O14529 1486 aa14.36□□□□□ -0.11
ZFYVE16-204ENST00000509558 GOLGA3Q08378 1498 aa14.33□□□□□ -0.12
ZFYVE16-204ENST00000509558 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
ZFYVE16-204ENST00000509558 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
ZFYVE16-204ENST00000509558 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
ZFYVE16-204ENST00000509558 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
ZFYVE16-204ENST00000509558 ERICH3Q5RHP9 1530 aa14.29□□□□□ -0.12
ZFYVE16-204ENST00000509558 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
ZFYVE16-204ENST00000509558 RAPGEF2Q9Y4G8 1499 aa14.28□□□□□ -0.12
ZFYVE16-204ENST00000509558 IGF1RP08069 1367 aa14.25□□□□□ -0.13
ZFYVE16-204ENST00000509558 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
ZFYVE16-204ENST00000509558 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
ZFYVE16-204ENST00000509558 CUL7Q14999 1698 aa14.2□□□□□ -0.14
ZFYVE16-204ENST00000509558 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
ZFYVE16-204ENST00000509558 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
ZFYVE16-204ENST00000509558 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
ZFYVE16-204ENST00000509558 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
ZFYVE16-204ENST00000509558 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
ZFYVE16-204ENST00000509558 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
ZFYVE16-204ENST00000509558 UBTFP17480 764 aaKnown RBP14.15□□□□□ -0.14
ZFYVE16-204ENST00000509558 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
ZFYVE16-204ENST00000509558 AQRO60306 1485 aaKnown RBP eCLIP14.12□□□□□ -0.15
ZFYVE16-204ENST00000509558 ADAMTS12P58397 1594 aa14.11□□□□□ -0.15
ZFYVE16-204ENST00000509558 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
ZFYVE16-204ENST00000509558 CLIP1P30622 1438 aa14.07□□□□□ -0.16
ZFYVE16-204ENST00000509558 CTTNBP2Q8WZ74 1663 aa14.05□□□□□ -0.16
ZFYVE16-204ENST00000509558 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
ZFYVE16-204ENST00000509558 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
ZFYVE16-204ENST00000509558 ARAP1Q96P48 1450 aa14□□□□□ -0.17
ZFYVE16-204ENST00000509558 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
ZFYVE16-204ENST00000509558 ARHGAP35Q9NRY4 1499 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms