RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
CHMP2B-201ENST00000263780 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.91
CHMP2B-201ENST00000263780 HRCP23327 699 aa20.74■□□□□ 0.91
CHMP2B-201ENST00000263780 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
CHMP2B-201ENST00000263780 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
CHMP2B-201ENST00000263780 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
CHMP2B-201ENST00000263780 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
CHMP2B-201ENST00000263780 PCGF6Q9BYE7 350 aa20.3■□□□□ 0.84
CHMP2B-201ENST00000263780 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
CHMP2B-201ENST00000263780 DCAF1Q9Y4B6 1507 aa20.16■□□□□ 0.82
CHMP2B-201ENST00000263780 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
CHMP2B-201ENST00000263780 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
CHMP2B-201ENST00000263780 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
CHMP2B-201ENST00000263780 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.77
CHMP2B-201ENST00000263780 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
CHMP2B-201ENST00000263780 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
CHMP2B-201ENST00000263780 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
CHMP2B-201ENST00000263780 ABCC9O60706 1549 aa19.35■□□□□ 0.69
CHMP2B-201ENST00000263780 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
CHMP2B-201ENST00000263780 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
CHMP2B-201ENST00000263780 MYT1Q01538 1121 aa19.21■□□□□ 0.67
CHMP2B-201ENST00000263780 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
CHMP2B-201ENST00000263780 ACIN1Q9UKV3 1341 aaKnown RBP19.1■□□□□ 0.65
CHMP2B-201ENST00000263780 FAM9AQ8IZU1 332 aaPredicted RBP19.06■□□□□ 0.64
CHMP2B-201ENST00000263780 CENPBP07199 599 aaPredicted RBP19.02■□□□□ 0.64
CHMP2B-201ENST00000263780 CCER1Q8TC90 406 aaPredicted RBP18.96■□□□□ 0.63
CHMP2B-201ENST00000263780 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
CHMP2B-201ENST00000263780 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
CHMP2B-201ENST00000263780 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
CHMP2B-201ENST00000263780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
CHMP2B-201ENST00000263780 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
CHMP2B-201ENST00000263780 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
CHMP2B-201ENST00000263780 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
CHMP2B-201ENST00000263780 MROH2BQ7Z745 1585 aa18.65■□□□□ 0.58
CHMP2B-201ENST00000263780 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
CHMP2B-201ENST00000263780 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
CHMP2B-201ENST00000263780 NACADO15069 1562 aa18.59■□□□□ 0.57
CHMP2B-201ENST00000263780 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
CHMP2B-201ENST00000263780 WIZO95785 1651 aa18.54■□□□□ 0.56
CHMP2B-201ENST00000263780 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
CHMP2B-201ENST00000263780 CEP162Q5TB80 1403 aa18.53■□□□□ 0.56
CHMP2B-201ENST00000263780 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
CHMP2B-201ENST00000263780 EEA1Q15075 1411 aa18.48■□□□□ 0.55
CHMP2B-201ENST00000263780 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
CHMP2B-201ENST00000263780 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
CHMP2B-201ENST00000263780 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
CHMP2B-201ENST00000263780 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
CHMP2B-201ENST00000263780 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
CHMP2B-201ENST00000263780 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
CHMP2B-201ENST00000263780 MIER1Q8N108 512 aa18.34■□□□□ 0.53
CHMP2B-201ENST00000263780 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
CHMP2B-201ENST00000263780 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
CHMP2B-201ENST00000263780 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
CHMP2B-201ENST00000263780 SOGA1O94964 1423 aa18.29■□□□□ 0.52
CHMP2B-201ENST00000263780 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
CHMP2B-201ENST00000263780 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
CHMP2B-201ENST00000263780 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
CHMP2B-201ENST00000263780 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
CHMP2B-201ENST00000263780 APLP2Q06481 763 aa18.14■□□□□ 0.49
CHMP2B-201ENST00000263780 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
CHMP2B-201ENST00000263780 CLIP1P30622 1438 aa18.09■□□□□ 0.49
CHMP2B-201ENST00000263780 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
CHMP2B-201ENST00000263780 KIF21BO75037 1637 aa18.09■□□□□ 0.49
CHMP2B-201ENST00000263780 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
CHMP2B-201ENST00000263780 SUPT16HQ9Y5B9 1047 aaKnown RBP18.03■□□□□ 0.48
CHMP2B-201ENST00000263780 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
CHMP2B-201ENST00000263780 ANP32EQ9BTT0 268 aa17.9■□□□□ 0.46
CHMP2B-201ENST00000263780 TSHZ2Q9NRE2 1034 aa17.88■□□□□ 0.45
CHMP2B-201ENST00000263780 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
CHMP2B-201ENST00000263780 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
CHMP2B-201ENST00000263780 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
CHMP2B-201ENST00000263780 CUX2O14529 1486 aa17.77■□□□□ 0.43
CHMP2B-201ENST00000263780 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
CHMP2B-201ENST00000263780 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
CHMP2B-201ENST00000263780 UNC13AQ9UPW8 1703 aa17.73■□□□□ 0.43
CHMP2B-201ENST00000263780 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
CHMP2B-201ENST00000263780 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
CHMP2B-201ENST00000263780 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
CHMP2B-201ENST00000263780 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
CHMP2B-201ENST00000263780 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
CHMP2B-201ENST00000263780 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
CHMP2B-201ENST00000263780 NEFLP07196 543 aa17.63■□□□□ 0.41
CHMP2B-201ENST00000263780 FKBP8Q14318 412 aa17.6■□□□□ 0.41
CHMP2B-201ENST00000263780 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
CHMP2B-201ENST00000263780 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
CHMP2B-201ENST00000263780 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.4
CHMP2B-201ENST00000263780 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
CHMP2B-201ENST00000263780 BICRAQ9NZM4 1560 aa17.54■□□□□ 0.4
CHMP2B-201ENST00000263780 CCER2I3L3R5 266 aa17.54■□□□□ 0.4
CHMP2B-201ENST00000263780 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
CHMP2B-201ENST00000263780 BCANQ96GW7 911 aa17.53■□□□□ 0.4
CHMP2B-201ENST00000263780 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
CHMP2B-201ENST00000263780 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHMP2B-201ENST00000263780 RBM19Q9Y4C8 960 aaKnown RBP17.51■□□□□ 0.39
CHMP2B-201ENST00000263780 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
CHMP2B-201ENST00000263780 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
CHMP2B-201ENST00000263780 SETD5Q9C0A6 1442 aa17.5■□□□□ 0.39
CHMP2B-201ENST00000263780 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
CHMP2B-201ENST00000263780 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
CHMP2B-201ENST00000263780 PPP1R15AO75807 674 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms