RNA–Protein interactions for RNA: ENST00000486716.5

MKNK1-214, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 2

Gene MKNK1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-214ENST00000486716 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
MKNK1-214ENST00000486716 CCDC180Q9P1Z9 1646 aa21.46■■□□□ 1.03
MKNK1-214ENST00000486716 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
MKNK1-214ENST00000486716 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
MKNK1-214ENST00000486716 ABCC9O60706 1549 aa20.14■□□□□ 0.81
MKNK1-214ENST00000486716 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
MKNK1-214ENST00000486716 NACADO15069 1562 aa19.97■□□□□ 0.79
MKNK1-214ENST00000486716 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
MKNK1-214ENST00000486716 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
MKNK1-214ENST00000486716 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
MKNK1-214ENST00000486716 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
MKNK1-214ENST00000486716 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
MKNK1-214ENST00000486716 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
MKNK1-214ENST00000486716 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
MKNK1-214ENST00000486716 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
MKNK1-214ENST00000486716 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
MKNK1-214ENST00000486716 SMARCA4P51532 1647 aa18.77■□□□□ 0.6
MKNK1-214ENST00000486716 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
MKNK1-214ENST00000486716 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
MKNK1-214ENST00000486716 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
MKNK1-214ENST00000486716 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
MKNK1-214ENST00000486716 WIZO95785 1651 aa18.59■□□□□ 0.57
MKNK1-214ENST00000486716 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
MKNK1-214ENST00000486716 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
MKNK1-214ENST00000486716 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
MKNK1-214ENST00000486716 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
MKNK1-214ENST00000486716 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
MKNK1-214ENST00000486716 HMGXB3Q12766 1538 aa18.39■□□□□ 0.53
MKNK1-214ENST00000486716 CC2D2AQ9P2K1 1620 aa18.35■□□□□ 0.53
MKNK1-214ENST00000486716 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
MKNK1-214ENST00000486716 CCDC88BA6NC98 1476 aa18.19■□□□□ 0.5
MKNK1-214ENST00000486716 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
MKNK1-214ENST00000486716 CFTRP13569 1480 aa17.9■□□□□ 0.46
MKNK1-214ENST00000486716 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
MKNK1-214ENST00000486716 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
MKNK1-214ENST00000486716 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
MKNK1-214ENST00000486716 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
MKNK1-214ENST00000486716 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
MKNK1-214ENST00000486716 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
MKNK1-214ENST00000486716 NESP48681 1621 aa17.65■□□□□ 0.42
MKNK1-214ENST00000486716 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
MKNK1-214ENST00000486716 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
MKNK1-214ENST00000486716 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
MKNK1-214ENST00000486716 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
MKNK1-214ENST00000486716 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
MKNK1-214ENST00000486716 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
MKNK1-214ENST00000486716 KIF21AQ7Z4S6 1674 aa17.56■□□□□ 0.4
MKNK1-214ENST00000486716 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
MKNK1-214ENST00000486716 CUX1P39880 1505 aa17.54■□□□□ 0.4
MKNK1-214ENST00000486716 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
MKNK1-214ENST00000486716 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
MKNK1-214ENST00000486716 EEA1Q15075 1411 aa17.42■□□□□ 0.38
MKNK1-214ENST00000486716 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
MKNK1-214ENST00000486716 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
MKNK1-214ENST00000486716 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
MKNK1-214ENST00000486716 WDR62O43379 1518 aa17.35■□□□□ 0.37
MKNK1-214ENST00000486716 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.37
MKNK1-214ENST00000486716 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
MKNK1-214ENST00000486716 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
MKNK1-214ENST00000486716 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
MKNK1-214ENST00000486716 SOGA1O94964 1423 aa17.3■□□□□ 0.36
MKNK1-214ENST00000486716 ABCA10Q8WWZ4 1543 aa17.28■□□□□ 0.36
MKNK1-214ENST00000486716 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
MKNK1-214ENST00000486716 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
MKNK1-214ENST00000486716 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
MKNK1-214ENST00000486716 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
MKNK1-214ENST00000486716 KIF21BO75037 1637 aa17.2■□□□□ 0.34
MKNK1-214ENST00000486716 CUX2O14529 1486 aa17.18■□□□□ 0.34
MKNK1-214ENST00000486716 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
MKNK1-214ENST00000486716 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
MKNK1-214ENST00000486716 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
MKNK1-214ENST00000486716 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
MKNK1-214ENST00000486716 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
MKNK1-214ENST00000486716 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
MKNK1-214ENST00000486716 CUL7Q14999 1698 aa17.1■□□□□ 0.33
MKNK1-214ENST00000486716 IGF1RP08069 1367 aa17.09■□□□□ 0.33
MKNK1-214ENST00000486716 GOLGA3Q08378 1498 aa17.08■□□□□ 0.32
MKNK1-214ENST00000486716 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
MKNK1-214ENST00000486716 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
MKNK1-214ENST00000486716 LOC105371045A0A1W2PR82 267 aa17.07■□□□□ 0.32
MKNK1-214ENST00000486716 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
MKNK1-214ENST00000486716 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.31
MKNK1-214ENST00000486716 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
MKNK1-214ENST00000486716 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
MKNK1-214ENST00000486716 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
MKNK1-214ENST00000486716 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
MKNK1-214ENST00000486716 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
MKNK1-214ENST00000486716 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.317e-6■■□□□ 12.2
MKNK1-214ENST00000486716 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
MKNK1-214ENST00000486716 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
MKNK1-214ENST00000486716 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
MKNK1-214ENST00000486716 CTTNBP2Q8WZ74 1663 aa16.89■□□□□ 0.29
MKNK1-214ENST00000486716 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
MKNK1-214ENST00000486716 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
MKNK1-214ENST00000486716 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
MKNK1-214ENST00000486716 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
MKNK1-214ENST00000486716 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
MKNK1-214ENST00000486716 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
MKNK1-214ENST00000486716 CLIP1P30622 1438 aa16.76■□□□□ 0.27
MKNK1-214ENST00000486716 EFCAB5A4FU69 1503 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms