RNA–Protein interactions for RNA: ENST00000423670.1

SCYL3-204, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-204ENST00000423670 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
SCYL3-204ENST00000423670 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.39
SCYL3-204ENST00000423670 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
SCYL3-204ENST00000423670 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
SCYL3-204ENST00000423670 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
SCYL3-204ENST00000423670 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
SCYL3-204ENST00000423670 ABCC9O60706 1549 aa16.49■□□□□ 0.23
SCYL3-204ENST00000423670 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
SCYL3-204ENST00000423670 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
SCYL3-204ENST00000423670 NACADO15069 1562 aa16.28■□□□□ 0.2
SCYL3-204ENST00000423670 SCRIBQ14160 1630 aa16.27■□□□□ 0.19
SCYL3-204ENST00000423670 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
SCYL3-204ENST00000423670 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
SCYL3-204ENST00000423670 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
SCYL3-204ENST00000423670 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
SCYL3-204ENST00000423670 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.12
SCYL3-204ENST00000423670 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.11
SCYL3-204ENST00000423670 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
SCYL3-204ENST00000423670 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCYL3-204ENST00000423670 WIZO95785 1651 aa15.65■□□□□ 0.1
SCYL3-204ENST00000423670 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
SCYL3-204ENST00000423670 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
SCYL3-204ENST00000423670 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
SCYL3-204ENST00000423670 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
SCYL3-204ENST00000423670 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
SCYL3-204ENST00000423670 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
SCYL3-204ENST00000423670 EIF4G1Q04637 1599 aaKnown RBP15.33■□□□□ 0.04
SCYL3-204ENST00000423670 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
SCYL3-204ENST00000423670 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
SCYL3-204ENST00000423670 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
SCYL3-204ENST00000423670 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
SCYL3-204ENST00000423670 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
SCYL3-204ENST00000423670 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
SCYL3-204ENST00000423670 NCAPD3P42695 1498 aa15.07■□□□□ 0
SCYL3-204ENST00000423670 HMGXB3Q12766 1538 aa15.03■□□□□ -0
SCYL3-204ENST00000423670 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
SCYL3-204ENST00000423670 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
SCYL3-204ENST00000423670 SOGA1O94964 1423 aa14.9□□□□□ -0.02
SCYL3-204ENST00000423670 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
SCYL3-204ENST00000423670 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
SCYL3-204ENST00000423670 RUSC2Q8N2Y8 1516 aa14.87□□□□□ -0.03
SCYL3-204ENST00000423670 CFTRP13569 1480 aa14.82□□□□□ -0.04
SCYL3-204ENST00000423670 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
SCYL3-204ENST00000423670 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
SCYL3-204ENST00000423670 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
SCYL3-204ENST00000423670 EEA1Q15075 1411 aa14.76□□□□□ -0.05
SCYL3-204ENST00000423670 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
SCYL3-204ENST00000423670 CUX1P39880 1505 aa14.72□□□□□ -0.05
SCYL3-204ENST00000423670 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.05
SCYL3-204ENST00000423670 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
SCYL3-204ENST00000423670 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
SCYL3-204ENST00000423670 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
SCYL3-204ENST00000423670 GOLGA3Q08378 1498 aa14.62□□□□□ -0.07
SCYL3-204ENST00000423670 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
SCYL3-204ENST00000423670 TRIM26Q12899 539 aaPredicted RBP14.61□□□□□ -0.07
SCYL3-204ENST00000423670 KIF21BO75037 1637 aa14.61□□□□□ -0.07
SCYL3-204ENST00000423670 NESP48681 1621 aa14.59□□□□□ -0.07
SCYL3-204ENST00000423670 UBTFP17480 764 aaKnown RBP14.59□□□□□ -0.07
SCYL3-204ENST00000423670 CEP164Q9UPV0 1460 aa14.59□□□□□ -0.07
SCYL3-204ENST00000423670 RAPGEF2Q9Y4G8 1499 aa14.56□□□□□ -0.08
SCYL3-204ENST00000423670 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
SCYL3-204ENST00000423670 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
SCYL3-204ENST00000423670 PRXQ9BXM0 1461 aa14.51□□□□□ -0.09
SCYL3-204ENST00000423670 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
SCYL3-204ENST00000423670 HRCP23327 699 aa14.5□□□□□ -0.09
SCYL3-204ENST00000423670 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
SCYL3-204ENST00000423670 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
SCYL3-204ENST00000423670 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
SCYL3-204ENST00000423670 CUX2O14529 1486 aa14.45□□□□□ -0.1
SCYL3-204ENST00000423670 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
SCYL3-204ENST00000423670 DNMBPQ6XZF7 1577 aa14.44□□□□□ -0.1
SCYL3-204ENST00000423670 CLIP1P30622 1438 aa14.43□□□□□ -0.1
SCYL3-204ENST00000423670 IGF1RP08069 1367 aa14.42□□□□□ -0.1
SCYL3-204ENST00000423670 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
SCYL3-204ENST00000423670 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
SCYL3-204ENST00000423670 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
SCYL3-204ENST00000423670 RANGAP1P46060 587 aaPredicted RBP14.37□□□□□ -0.11
SCYL3-204ENST00000423670 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
SCYL3-204ENST00000423670 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
SCYL3-204ENST00000423670 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
SCYL3-204ENST00000423670 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
SCYL3-204ENST00000423670 VPS8Q8N3P4 1428 aa14.33□□□□□ -0.12
SCYL3-204ENST00000423670 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
SCYL3-204ENST00000423670 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
SCYL3-204ENST00000423670 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
SCYL3-204ENST00000423670 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
SCYL3-204ENST00000423670 TDRD9Q8NDG6 1382 aaKnown RBP14.23□□□□□ -0.13
SCYL3-204ENST00000423670 ABCA5Q8WWZ7 1642 aa14.21□□□□□ -0.13
SCYL3-204ENST00000423670 TARBP1Q13395 1621 aaKnown RBP14.2□□□□□ -0.14
SCYL3-204ENST00000423670 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
SCYL3-204ENST00000423670 CUL7Q14999 1698 aa14.17□□□□□ -0.14
SCYL3-204ENST00000423670 GAPVD1Q14C86 1478 aa14.17□□□□□ -0.14
SCYL3-204ENST00000423670 APLP2Q06481 763 aa14.13□□□□□ -0.15
SCYL3-204ENST00000423670 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
SCYL3-204ENST00000423670 WDR62O43379 1518 aa14.11□□□□□ -0.15
SCYL3-204ENST00000423670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
SCYL3-204ENST00000423670 AQRO60306 1485 aaKnown RBP eCLIP14.1□□□□□ -0.15
SCYL3-204ENST00000423670 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.16
SCYL3-204ENST00000423670 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
SCYL3-204ENST00000423670 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms