RNA–Protein interactions for RNA: ENST00000406936.7

COMMD6-205, Transcript of COMM domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD6, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-205ENST00000406936 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
COMMD6-205ENST00000406936 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.46
COMMD6-205ENST00000406936 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
COMMD6-205ENST00000406936 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
COMMD6-205ENST00000406936 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
COMMD6-205ENST00000406936 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
COMMD6-205ENST00000406936 FOXD1Q16676 465 aa20.64■□□□□ 0.89
COMMD6-205ENST00000406936 MSH5O43196 834 aa20■□□□□ 0.79
COMMD6-205ENST00000406936 ABCC9O60706 1549 aa19.88■□□□□ 0.77
COMMD6-205ENST00000406936 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
COMMD6-205ENST00000406936 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
COMMD6-205ENST00000406936 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
COMMD6-205ENST00000406936 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
COMMD6-205ENST00000406936 NACADO15069 1562 aa18.56■□□□□ 0.56
COMMD6-205ENST00000406936 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
COMMD6-205ENST00000406936 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
COMMD6-205ENST00000406936 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
COMMD6-205ENST00000406936 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
COMMD6-205ENST00000406936 ADRA2BP18089 450 aa18.26■□□□□ 0.51
COMMD6-205ENST00000406936 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
COMMD6-205ENST00000406936 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
COMMD6-205ENST00000406936 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
COMMD6-205ENST00000406936 CC2D2AQ9P2K1 1620 aa17.99■□□□□ 0.47
COMMD6-205ENST00000406936 SHROOM4Q9ULL8 1493 aa17.97■□□□□ 0.47
COMMD6-205ENST00000406936 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
COMMD6-205ENST00000406936 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
COMMD6-205ENST00000406936 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
COMMD6-205ENST00000406936 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
COMMD6-205ENST00000406936 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
COMMD6-205ENST00000406936 CACNB1Q02641 598 aaPredicted RBP17.74■□□□□ 0.43
COMMD6-205ENST00000406936 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
COMMD6-205ENST00000406936 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
COMMD6-205ENST00000406936 CUX2O14529 1486 aa17.3■□□□□ 0.36
COMMD6-205ENST00000406936 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
COMMD6-205ENST00000406936 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
COMMD6-205ENST00000406936 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
COMMD6-205ENST00000406936 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
COMMD6-205ENST00000406936 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.31
COMMD6-205ENST00000406936 NESP48681 1621 aa17■□□□□ 0.31
COMMD6-205ENST00000406936 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
COMMD6-205ENST00000406936 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
COMMD6-205ENST00000406936 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
COMMD6-205ENST00000406936 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
COMMD6-205ENST00000406936 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
COMMD6-205ENST00000406936 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
COMMD6-205ENST00000406936 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
COMMD6-205ENST00000406936 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
COMMD6-205ENST00000406936 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
COMMD6-205ENST00000406936 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
COMMD6-205ENST00000406936 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
COMMD6-205ENST00000406936 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
COMMD6-205ENST00000406936 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
COMMD6-205ENST00000406936 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
COMMD6-205ENST00000406936 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
COMMD6-205ENST00000406936 WDR62O43379 1518 aa16.6■□□□□ 0.25
COMMD6-205ENST00000406936 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
COMMD6-205ENST00000406936 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
COMMD6-205ENST00000406936 WIZO95785 1651 aa16.44■□□□□ 0.22
COMMD6-205ENST00000406936 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
COMMD6-205ENST00000406936 POTEHQ6S545 545 aa16.41■□□□□ 0.22
COMMD6-205ENST00000406936 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
COMMD6-205ENST00000406936 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
COMMD6-205ENST00000406936 RIMBP3CA6NJZ7 1639 aa16.32■□□□□ 0.2
COMMD6-205ENST00000406936 RIMBP3BA6NNM3 1639 aa16.32■□□□□ 0.2
COMMD6-205ENST00000406936 RIMBP3Q9UFD9 1639 aa16.32■□□□□ 0.2
COMMD6-205ENST00000406936 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
COMMD6-205ENST00000406936 CFTRP13569 1480 aa16.32■□□□□ 0.2
COMMD6-205ENST00000406936 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
COMMD6-205ENST00000406936 PRDM2Q13029 1718 aa16.24■□□□□ 0.19
COMMD6-205ENST00000406936 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
COMMD6-205ENST00000406936 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
COMMD6-205ENST00000406936 ZNF608Q9ULD9 1512 aaPredicted RBP16.16■□□□□ 0.18
COMMD6-205ENST00000406936 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
COMMD6-205ENST00000406936 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
COMMD6-205ENST00000406936 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.17
COMMD6-205ENST00000406936 CHD1O14646 1710 aa16.08■□□□□ 0.16
COMMD6-205ENST00000406936 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
COMMD6-205ENST00000406936 ARAP1Q96P48 1450 aa16.02■□□□□ 0.16
COMMD6-205ENST00000406936 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
COMMD6-205ENST00000406936 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
COMMD6-205ENST00000406936 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
COMMD6-205ENST00000406936 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
COMMD6-205ENST00000406936 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
COMMD6-205ENST00000406936 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
COMMD6-205ENST00000406936 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.14
COMMD6-205ENST00000406936 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
COMMD6-205ENST00000406936 POLA1P09884 1462 aaPredicted RBP15.86■□□□□ 0.13
COMMD6-205ENST00000406936 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
COMMD6-205ENST00000406936 CNKSR2Q8WXI2 1034 aa15.82■□□□□ 0.12
COMMD6-205ENST00000406936 FBLN2P98095 1184 aa15.81■□□□□ 0.12
COMMD6-205ENST00000406936 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
COMMD6-205ENST00000406936 WDR97A6NE52 1622 aa15.77■□□□□ 0.12
COMMD6-205ENST00000406936 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
COMMD6-205ENST00000406936 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
COMMD6-205ENST00000406936 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
COMMD6-205ENST00000406936 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
COMMD6-205ENST00000406936 SOGA1O94964 1423 aa15.73■□□□□ 0.11
COMMD6-205ENST00000406936 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.11
COMMD6-205ENST00000406936 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
COMMD6-205ENST00000406936 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms