RNA–Protein interactions for RNA: ENST00000428963.6

CENPN-204, Transcript of centromere protein N, humanhuman

TSL 2 BASIC

Gene CENPN, Length 971 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-204ENST00000428963 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
CENPN-204ENST00000428963 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
CENPN-204ENST00000428963 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
CENPN-204ENST00000428963 PHF23Q9BUL5 403 aaPredicted RBP23.32■■□□□ 1.32
CENPN-204ENST00000428963 FOXD1Q16676 465 aa22.04■■□□□ 1.12
CENPN-204ENST00000428963 PLPPR3Q6T4P5 718 aa20.94■□□□□ 0.94
CENPN-204ENST00000428963 MSH5O43196 834 aa20.73■□□□□ 0.91
CENPN-204ENST00000428963 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
CENPN-204ENST00000428963 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
CENPN-204ENST00000428963 ADRA2BP18089 450 aa20.42■□□□□ 0.86
CENPN-204ENST00000428963 POTEDQ86YR6 584 aa20.33■□□□□ 0.85
CENPN-204ENST00000428963 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
CENPN-204ENST00000428963 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
CENPN-204ENST00000428963 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
CENPN-204ENST00000428963 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
CENPN-204ENST00000428963 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
CENPN-204ENST00000428963 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
CENPN-204ENST00000428963 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
CENPN-204ENST00000428963 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CENPN-204ENST00000428963 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
CENPN-204ENST00000428963 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
CENPN-204ENST00000428963 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
CENPN-204ENST00000428963 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
CENPN-204ENST00000428963 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
CENPN-204ENST00000428963 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
CENPN-204ENST00000428963 ABCC9O60706 1549 aa17.34■□□□□ 0.37
CENPN-204ENST00000428963 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
CENPN-204ENST00000428963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
CENPN-204ENST00000428963 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
CENPN-204ENST00000428963 KCNA4P22459 653 aa16.87■□□□□ 0.29
CENPN-204ENST00000428963 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
CENPN-204ENST00000428963 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
CENPN-204ENST00000428963 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
CENPN-204ENST00000428963 CAPN15O75808 1086 aa16.53■□□□□ 0.24
CENPN-204ENST00000428963 DSG3P32926 999 aa16.48■□□□□ 0.23
CENPN-204ENST00000428963 APLP2Q06481 763 aa16.4■□□□□ 0.22
CENPN-204ENST00000428963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
CENPN-204ENST00000428963 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
CENPN-204ENST00000428963 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
CENPN-204ENST00000428963 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
CENPN-204ENST00000428963 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
CENPN-204ENST00000428963 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
CENPN-204ENST00000428963 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
CENPN-204ENST00000428963 NACADO15069 1562 aa16.14■□□□□ 0.17
CENPN-204ENST00000428963 ABCB7O75027 752 aa16.11■□□□□ 0.17
CENPN-204ENST00000428963 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
CENPN-204ENST00000428963 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
CENPN-204ENST00000428963 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
CENPN-204ENST00000428963 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
CENPN-204ENST00000428963 POTEHQ6S545 545 aa15.93■□□□□ 0.14
CENPN-204ENST00000428963 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
CENPN-204ENST00000428963 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
CENPN-204ENST00000428963 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
CENPN-204ENST00000428963 POLA2Q14181 598 aa15.79■□□□□ 0.12
CENPN-204ENST00000428963 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
CENPN-204ENST00000428963 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
CENPN-204ENST00000428963 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
CENPN-204ENST00000428963 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
CENPN-204ENST00000428963 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
CENPN-204ENST00000428963 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
CENPN-204ENST00000428963 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
CENPN-204ENST00000428963 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
CENPN-204ENST00000428963 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
CENPN-204ENST00000428963 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
CENPN-204ENST00000428963 ZBTB22O15209 634 aa15.5■□□□□ 0.07
CENPN-204ENST00000428963 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
CENPN-204ENST00000428963 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
CENPN-204ENST00000428963 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
CENPN-204ENST00000428963 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
CENPN-204ENST00000428963 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
CENPN-204ENST00000428963 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
CENPN-204ENST00000428963 FBLN2P98095 1184 aa15.09■□□□□ 0.01
CENPN-204ENST00000428963 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
CENPN-204ENST00000428963 PITPNM1O00562 1244 aa15.03■□□□□ -0
CENPN-204ENST00000428963 SPDYE6P0CI01 402 aa15.03■□□□□ -0
CENPN-204ENST00000428963 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
CENPN-204ENST00000428963 PIP4P2Q8N4L2 257 aa15.03■□□□□ -0
CENPN-204ENST00000428963 CUX2O14529 1486 aa14.96□□□□□ -0.01
CENPN-204ENST00000428963 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
CENPN-204ENST00000428963 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
CENPN-204ENST00000428963 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
CENPN-204ENST00000428963 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
CENPN-204ENST00000428963 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
CENPN-204ENST00000428963 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
CENPN-204ENST00000428963 NESP48681 1621 aa14.86□□□□□ -0.03
CENPN-204ENST00000428963 SSUH2Q9Y2M2 353 aa14.81□□□□□ -0.04
CENPN-204ENST00000428963 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
CENPN-204ENST00000428963 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
CENPN-204ENST00000428963 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
CENPN-204ENST00000428963 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
CENPN-204ENST00000428963 HAX1O00165 279 aa14.77□□□□□ -0.05
CENPN-204ENST00000428963 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
CENPN-204ENST00000428963 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
CENPN-204ENST00000428963 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
CENPN-204ENST00000428963 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
CENPN-204ENST00000428963 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
CENPN-204ENST00000428963 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
CENPN-204ENST00000428963 PRKAR2AP13861 404 aaKnown RBP14.64□□□□□ -0.07
CENPN-204ENST00000428963 PEG3Q9GZU2 1588 aa14.63□□□□□ -0.07
CENPN-204ENST00000428963 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms