RNA–Protein interactions for RNA: ENST00000582302.2

TNFAIP1-205, Transcript of TNF alpha induced protein 1, humanhuman

TSL 5

Gene TNFAIP1, Length 579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-205ENST00000582302 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
TNFAIP1-205ENST00000582302 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
TNFAIP1-205ENST00000582302 ABCC9O60706 1549 aa22.58■■□□□ 1.21
TNFAIP1-205ENST00000582302 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
TNFAIP1-205ENST00000582302 NACADO15069 1562 aa21.57■■□□□ 1.04
TNFAIP1-205ENST00000582302 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
TNFAIP1-205ENST00000582302 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
TNFAIP1-205ENST00000582302 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
TNFAIP1-205ENST00000582302 ZCCHC6Q5VYS8 1495 aaKnown RBP21.1■□□□□ 0.97
TNFAIP1-205ENST00000582302 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
TNFAIP1-205ENST00000582302 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
TNFAIP1-205ENST00000582302 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
TNFAIP1-205ENST00000582302 UNC13AQ9UPW8 1703 aa20.86■□□□□ 0.93
TNFAIP1-205ENST00000582302 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
TNFAIP1-205ENST00000582302 SCRIBQ14160 1630 aa20.64■□□□□ 0.9
TNFAIP1-205ENST00000582302 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
TNFAIP1-205ENST00000582302 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
TNFAIP1-205ENST00000582302 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
TNFAIP1-205ENST00000582302 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
TNFAIP1-205ENST00000582302 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
TNFAIP1-205ENST00000582302 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
TNFAIP1-205ENST00000582302 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
TNFAIP1-205ENST00000582302 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
TNFAIP1-205ENST00000582302 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
TNFAIP1-205ENST00000582302 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
TNFAIP1-205ENST00000582302 PEG3Q9GZU2 1588 aa19.64■□□□□ 0.73
TNFAIP1-205ENST00000582302 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
TNFAIP1-205ENST00000582302 CUX2O14529 1486 aa19.54■□□□□ 0.72
TNFAIP1-205ENST00000582302 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
TNFAIP1-205ENST00000582302 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
TNFAIP1-205ENST00000582302 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
TNFAIP1-205ENST00000582302 NESP48681 1621 aa19.37■□□□□ 0.69
TNFAIP1-205ENST00000582302 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
TNFAIP1-205ENST00000582302 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
TNFAIP1-205ENST00000582302 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
TNFAIP1-205ENST00000582302 WIZO95785 1651 aa19.24■□□□□ 0.67
TNFAIP1-205ENST00000582302 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
TNFAIP1-205ENST00000582302 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
TNFAIP1-205ENST00000582302 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
TNFAIP1-205ENST00000582302 CFTRP13569 1480 aa19.1■□□□□ 0.65
TNFAIP1-205ENST00000582302 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
TNFAIP1-205ENST00000582302 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
TNFAIP1-205ENST00000582302 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
TNFAIP1-205ENST00000582302 WDR62O43379 1518 aa19.03■□□□□ 0.64
TNFAIP1-205ENST00000582302 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
TNFAIP1-205ENST00000582302 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
TNFAIP1-205ENST00000582302 URB2Q14146 1524 aaKnown RBP18.8■□□□□ 0.6
TNFAIP1-205ENST00000582302 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
TNFAIP1-205ENST00000582302 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
TNFAIP1-205ENST00000582302 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
TNFAIP1-205ENST00000582302 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
TNFAIP1-205ENST00000582302 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
TNFAIP1-205ENST00000582302 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
TNFAIP1-205ENST00000582302 SUPT5HO00267 1087 aaKnown RBP18.52■□□□□ 0.56
TNFAIP1-205ENST00000582302 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
TNFAIP1-205ENST00000582302 POLA1P09884 1462 aaPredicted RBP18.49■□□□□ 0.55
TNFAIP1-205ENST00000582302 SOGA1O94964 1423 aa18.49■□□□□ 0.55
TNFAIP1-205ENST00000582302 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
TNFAIP1-205ENST00000582302 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
TNFAIP1-205ENST00000582302 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.54
TNFAIP1-205ENST00000582302 WDR97A6NE52 1622 aa18.42■□□□□ 0.54
TNFAIP1-205ENST00000582302 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.53
TNFAIP1-205ENST00000582302 FBLN2P98095 1184 aa18.38■□□□□ 0.53
TNFAIP1-205ENST00000582302 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
TNFAIP1-205ENST00000582302 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
TNFAIP1-205ENST00000582302 CUX1P39880 1505 aa18.34■□□□□ 0.53
TNFAIP1-205ENST00000582302 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP1-205ENST00000582302 GRIN2BQ13224 1484 aa18.32■□□□□ 0.52
TNFAIP1-205ENST00000582302 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
TNFAIP1-205ENST00000582302 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
TNFAIP1-205ENST00000582302 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.52
TNFAIP1-205ENST00000582302 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
TNFAIP1-205ENST00000582302 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
TNFAIP1-205ENST00000582302 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
TNFAIP1-205ENST00000582302 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
TNFAIP1-205ENST00000582302 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
TNFAIP1-205ENST00000582302 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
TNFAIP1-205ENST00000582302 SYNJ2O15056 1496 aa18.23■□□□□ 0.51
TNFAIP1-205ENST00000582302 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
TNFAIP1-205ENST00000582302 CHD1O14646 1710 aa18.19■□□□□ 0.5
TNFAIP1-205ENST00000582302 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
TNFAIP1-205ENST00000582302 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
TNFAIP1-205ENST00000582302 ABCA5Q8WWZ7 1642 aa18.11■□□□□ 0.49
TNFAIP1-205ENST00000582302 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
TNFAIP1-205ENST00000582302 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
TNFAIP1-205ENST00000582302 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
TNFAIP1-205ENST00000582302 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
TNFAIP1-205ENST00000582302 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
TNFAIP1-205ENST00000582302 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
TNFAIP1-205ENST00000582302 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
TNFAIP1-205ENST00000582302 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
TNFAIP1-205ENST00000582302 NUP160Q12769 1436 aa17.98■□□□□ 0.47
TNFAIP1-205ENST00000582302 ADAMTS12P58397 1594 aa17.96■□□□□ 0.47
TNFAIP1-205ENST00000582302 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
TNFAIP1-205ENST00000582302 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
TNFAIP1-205ENST00000582302 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
TNFAIP1-205ENST00000582302 IGF1RP08069 1367 aa17.83■□□□□ 0.45
TNFAIP1-205ENST00000582302 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
TNFAIP1-205ENST00000582302 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
TNFAIP1-205ENST00000582302 KIAA0586Q9BVV6 1533 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms