RNA–Protein interactions for RNA: ENST00000471897.1

NCOA6-204, Transcript of nuclear receptor coactivator 6, humanhuman

TSL 2

Gene NCOA6, Length 858 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA6-204ENST00000471897 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
NCOA6-204ENST00000471897 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
NCOA6-204ENST00000471897 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
NCOA6-204ENST00000471897 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
NCOA6-204ENST00000471897 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
NCOA6-204ENST00000471897 PLPPR3Q6T4P5 718 aa18.62■□□□□ 0.57
NCOA6-204ENST00000471897 FOXD1Q16676 465 aa17.92■□□□□ 0.46
NCOA6-204ENST00000471897 ADRA2BP18089 450 aa17.57■□□□□ 0.4
NCOA6-204ENST00000471897 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
NCOA6-204ENST00000471897 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
NCOA6-204ENST00000471897 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
NCOA6-204ENST00000471897 ABCC9O60706 1549 aa16.75■□□□□ 0.27
NCOA6-204ENST00000471897 KCNA4P22459 653 aa16.56■□□□□ 0.24
NCOA6-204ENST00000471897 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
NCOA6-204ENST00000471897 MSH5O43196 834 aa16.35■□□□□ 0.21
NCOA6-204ENST00000471897 ZCCHC6Q5VYS8 1495 aaKnown RBP16.28■□□□□ 0.2
NCOA6-204ENST00000471897 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
NCOA6-204ENST00000471897 NACADO15069 1562 aa16.17■□□□□ 0.18
NCOA6-204ENST00000471897 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
NCOA6-204ENST00000471897 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
NCOA6-204ENST00000471897 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
NCOA6-204ENST00000471897 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
NCOA6-204ENST00000471897 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
NCOA6-204ENST00000471897 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
NCOA6-204ENST00000471897 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
NCOA6-204ENST00000471897 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
NCOA6-204ENST00000471897 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
NCOA6-204ENST00000471897 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
NCOA6-204ENST00000471897 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
NCOA6-204ENST00000471897 SCRIBQ14160 1630 aa15.77■□□□□ 0.12
NCOA6-204ENST00000471897 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.1
NCOA6-204ENST00000471897 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
NCOA6-204ENST00000471897 BICRAQ9NZM4 1560 aa15.63■□□□□ 0.09
NCOA6-204ENST00000471897 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
NCOA6-204ENST00000471897 DMRT2Q9Y5R5 561 aa15.51■□□□□ 0.07
NCOA6-204ENST00000471897 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
NCOA6-204ENST00000471897 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
NCOA6-204ENST00000471897 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
NCOA6-204ENST00000471897 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
NCOA6-204ENST00000471897 ZBTB22O15209 634 aa15.27■□□□□ 0.04
NCOA6-204ENST00000471897 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
NCOA6-204ENST00000471897 CECR2Q9BXF3 1484 aa15.16■□□□□ 0.02
NCOA6-204ENST00000471897 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
NCOA6-204ENST00000471897 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
NCOA6-204ENST00000471897 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
NCOA6-204ENST00000471897 SMARCA4P51532 1647 aa15.08■□□□□ 0
NCOA6-204ENST00000471897 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
NCOA6-204ENST00000471897 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
NCOA6-204ENST00000471897 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
NCOA6-204ENST00000471897 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
NCOA6-204ENST00000471897 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
NCOA6-204ENST00000471897 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
NCOA6-204ENST00000471897 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
NCOA6-204ENST00000471897 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
NCOA6-204ENST00000471897 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
NCOA6-204ENST00000471897 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
NCOA6-204ENST00000471897 WIZO95785 1651 aa14.84□□□□□ -0.03
NCOA6-204ENST00000471897 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
NCOA6-204ENST00000471897 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
NCOA6-204ENST00000471897 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
NCOA6-204ENST00000471897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.07
NCOA6-204ENST00000471897 CCDC88BA6NC98 1476 aa14.56□□□□□ -0.08
NCOA6-204ENST00000471897 NESP48681 1621 aa14.52□□□□□ -0.09
NCOA6-204ENST00000471897 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
NCOA6-204ENST00000471897 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
NCOA6-204ENST00000471897 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
NCOA6-204ENST00000471897 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
NCOA6-204ENST00000471897 CFTRP13569 1480 aa14.45□□□□□ -0.1
NCOA6-204ENST00000471897 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
NCOA6-204ENST00000471897 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
NCOA6-204ENST00000471897 FANCD2Q9BXW9 1451 aa14.36□□□□□ -0.11
NCOA6-204ENST00000471897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
NCOA6-204ENST00000471897 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
NCOA6-204ENST00000471897 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
NCOA6-204ENST00000471897 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
NCOA6-204ENST00000471897 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
NCOA6-204ENST00000471897 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
NCOA6-204ENST00000471897 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
NCOA6-204ENST00000471897 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
NCOA6-204ENST00000471897 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
NCOA6-204ENST00000471897 WDR62O43379 1518 aa14.19□□□□□ -0.14
NCOA6-204ENST00000471897 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
NCOA6-204ENST00000471897 CUX2O14529 1486 aa14.18□□□□□ -0.14
NCOA6-204ENST00000471897 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
NCOA6-204ENST00000471897 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
NCOA6-204ENST00000471897 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
NCOA6-204ENST00000471897 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
NCOA6-204ENST00000471897 APLP2Q06481 763 aa14.1□□□□□ -0.15
NCOA6-204ENST00000471897 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
NCOA6-204ENST00000471897 CUX1P39880 1505 aa14.09□□□□□ -0.15
NCOA6-204ENST00000471897 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
NCOA6-204ENST00000471897 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
NCOA6-204ENST00000471897 FGD5Q6ZNL6 1462 aa14.03□□□□□ -0.16
NCOA6-204ENST00000471897 SYNJ1O43426 1573 aa14.02□□□□□ -0.16
NCOA6-204ENST00000471897 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
NCOA6-204ENST00000471897 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
NCOA6-204ENST00000471897 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
NCOA6-204ENST00000471897 SOGA1O94964 1423 aa13.98□□□□□ -0.17
NCOA6-204ENST00000471897 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
NCOA6-204ENST00000471897 FKBP8Q14318 412 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms