RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
NINJ1-205ENST00000490564 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
NINJ1-205ENST00000490564 ABCC9O60706 1549 aa22.61■■□□□ 1.21
NINJ1-205ENST00000490564 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
NINJ1-205ENST00000490564 NACADO15069 1562 aa21.68■■□□□ 1.06
NINJ1-205ENST00000490564 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
NINJ1-205ENST00000490564 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
NINJ1-205ENST00000490564 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
NINJ1-205ENST00000490564 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
NINJ1-205ENST00000490564 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
NINJ1-205ENST00000490564 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
NINJ1-205ENST00000490564 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
NINJ1-205ENST00000490564 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
NINJ1-205ENST00000490564 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
NINJ1-205ENST00000490564 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
NINJ1-205ENST00000490564 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
NINJ1-205ENST00000490564 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
NINJ1-205ENST00000490564 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
NINJ1-205ENST00000490564 SMARCA4P51532 1647 aa20.08■□□□□ 0.8
NINJ1-205ENST00000490564 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
NINJ1-205ENST00000490564 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
NINJ1-205ENST00000490564 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
NINJ1-205ENST00000490564 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
NINJ1-205ENST00000490564 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
NINJ1-205ENST00000490564 PEG3Q9GZU2 1588 aa19.9■□□□□ 0.78
NINJ1-205ENST00000490564 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
NINJ1-205ENST00000490564 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
NINJ1-205ENST00000490564 WIZO95785 1651 aa19.68■□□□□ 0.74
NINJ1-205ENST00000490564 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
NINJ1-205ENST00000490564 NESP48681 1621 aa19.53■□□□□ 0.72
NINJ1-205ENST00000490564 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
NINJ1-205ENST00000490564 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
NINJ1-205ENST00000490564 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
NINJ1-205ENST00000490564 CUX2O14529 1486 aa19.39■□□□□ 0.69
NINJ1-205ENST00000490564 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
NINJ1-205ENST00000490564 CADPSQ9ULU8 1353 aa19.36■□□□□ 0.69
NINJ1-205ENST00000490564 THOC2Q8NI27 1593 aaKnown RBP19.35■□□□□ 0.69
NINJ1-205ENST00000490564 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
NINJ1-205ENST00000490564 CFTRP13569 1480 aa19.24■□□□□ 0.67
NINJ1-205ENST00000490564 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
NINJ1-205ENST00000490564 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
NINJ1-205ENST00000490564 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
NINJ1-205ENST00000490564 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
NINJ1-205ENST00000490564 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
NINJ1-205ENST00000490564 WDR62O43379 1518 aa19.14■□□□□ 0.65
NINJ1-205ENST00000490564 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
NINJ1-205ENST00000490564 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
NINJ1-205ENST00000490564 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
NINJ1-205ENST00000490564 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
NINJ1-205ENST00000490564 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
NINJ1-205ENST00000490564 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
NINJ1-205ENST00000490564 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
NINJ1-205ENST00000490564 TARBP1Q13395 1621 aaKnown RBP18.69■□□□□ 0.58
NINJ1-205ENST00000490564 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
NINJ1-205ENST00000490564 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
NINJ1-205ENST00000490564 CUX1P39880 1505 aa18.65■□□□□ 0.58
NINJ1-205ENST00000490564 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
NINJ1-205ENST00000490564 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
NINJ1-205ENST00000490564 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
NINJ1-205ENST00000490564 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
NINJ1-205ENST00000490564 SOGA1O94964 1423 aa18.56■□□□□ 0.56
NINJ1-205ENST00000490564 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.568e-7■□□□□ 9.1
NINJ1-205ENST00000490564 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
NINJ1-205ENST00000490564 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
NINJ1-205ENST00000490564 CHD1O14646 1710 aa18.48■□□□□ 0.55
NINJ1-205ENST00000490564 TOP2BQ02880 1626 aa18.48■□□□□ 0.55
NINJ1-205ENST00000490564 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
NINJ1-205ENST00000490564 TDRD9Q8NDG6 1382 aaKnown RBP18.45■□□□□ 0.54
NINJ1-205ENST00000490564 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
NINJ1-205ENST00000490564 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
NINJ1-205ENST00000490564 ABCA10Q8WWZ4 1543 aa18.43■□□□□ 0.54
NINJ1-205ENST00000490564 ABCA5Q8WWZ7 1642 aa18.41■□□□□ 0.54
NINJ1-205ENST00000490564 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
NINJ1-205ENST00000490564 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
NINJ1-205ENST00000490564 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
NINJ1-205ENST00000490564 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
NINJ1-205ENST00000490564 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
NINJ1-205ENST00000490564 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
NINJ1-205ENST00000490564 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
NINJ1-205ENST00000490564 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
NINJ1-205ENST00000490564 FBLN2P98095 1184 aa18.28■□□□□ 0.52
NINJ1-205ENST00000490564 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
NINJ1-205ENST00000490564 CLASP1Q7Z460 1538 aa18.24■□□□□ 0.51
NINJ1-205ENST00000490564 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
NINJ1-205ENST00000490564 CHMP7Q8WUX9 453 aaPredicted RBP18.23■□□□□ 0.51
NINJ1-205ENST00000490564 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
NINJ1-205ENST00000490564 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
NINJ1-205ENST00000490564 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
NINJ1-205ENST00000490564 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
NINJ1-205ENST00000490564 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
NINJ1-205ENST00000490564 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
NINJ1-205ENST00000490564 NUP160Q12769 1436 aa18.08■□□□□ 0.49
NINJ1-205ENST00000490564 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
NINJ1-205ENST00000490564 CUL7Q14999 1698 aa18.06■□□□□ 0.48
NINJ1-205ENST00000490564 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
NINJ1-205ENST00000490564 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
NINJ1-205ENST00000490564 IGF1RP08069 1367 aa18■□□□□ 0.47
NINJ1-205ENST00000490564 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
NINJ1-205ENST00000490564 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
NINJ1-205ENST00000490564 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms