Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.45□□□□□ -1.228e-7■■■□□ 16.7
SND1Q7KZF4 APOA2-206ENST00000469730 265 ntTSL 511.79□□□□□ -0.528e-48■■■□□ 16.7
SND1Q7KZF4 SLC13A5-210ENST00000574824 2506 ntTSL 214.53□□□□□ -0.088e-9■■■□□ 16.7
SND1Q7KZF4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.23■□□□□ 0.992e-11■■■□□ 16.7
SND1Q7KZF4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.39■□□□□ 0.852e-11■■■□□ 16.7
SND1Q7KZF4 APLP2-219ENST00000533616 2041 ntTSL 219.81■□□□□ 0.762e-11■■■□□ 16.7
SND1Q7KZF4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.162e-11■■■□□ 16.7
SND1Q7KZF4 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.012e-11■■■□□ 16.7
SND1Q7KZF4 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.062e-11■■■□□ 16.7
SND1Q7KZF4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.543e-6■■■□□ 16.7
SND1Q7KZF4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.363e-6■■■□□ 16.7
SND1Q7KZF4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.263e-6■■■□□ 16.7
SND1Q7KZF4 LMAN2-203ENST00000502721 639 ntTSL 313.66□□□□□ -0.221e-10■■■□□ 16.7
SND1Q7KZF4 LGMNP1-201ENST00000441282 1300 ntBASIC12.26□□□□□ -0.451e-7■■■□□ 16.7
SND1Q7KZF4 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC11.88□□□□□ -0.519e-7■■■□□ 16.7
SND1Q7KZF4 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC10.14□□□□□ -0.799e-7■■■□□ 16.7
SND1Q7KZF4 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC9.22□□□□□ -0.939e-7■■■□□ 16.7
SND1Q7KZF4 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.9□□□□□ -0.999e-7■■■□□ 16.7
SND1Q7KZF4 AC090004.1-202ENST00000601399 787 ntTSL 511.65□□□□□ -0.545e-9■■■□□ 16.6
SND1Q7KZF4 SEC13-218ENST00000490283 740 ntTSL 218.06■□□□□ 0.483e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.153e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-215ENST00000477547 1313 ntTSL 215.94■□□□□ 0.143e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.07■□□□□ 03e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.093e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14.28□□□□□ -0.123e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-216ENST00000479868 2374 ntTSL 1 (best)14.04□□□□□ -0.163e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.74□□□□□ -0.213e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-214ENST00000476597 614 ntTSL 211.11□□□□□ -0.633e-11■■■□□ 16.6
SND1Q7KZF4 SEC13-219ENST00000492602 393 ntTSL 35.63□□□□□ -1.513e-11■■■□□ 16.6
SND1Q7KZF4 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.455e-7■■■□□ 16.6
SND1Q7KZF4 CANX-205ENST00000502673 1000 ntTSL 511.77□□□□□ -0.538e-16■■■□□ 16.6
SND1Q7KZF4 WARS-220ENST00000554950 1376 ntTSL 210.03□□□□□ -0.89e-11■■■□□ 16.6
SND1Q7KZF4 PCMT1-208ENST00000486585 801 ntTSL 310.21□□□□□ -0.771e-9■■■□□ 16.6
SND1Q7KZF4 C3-214ENST00000600763 406 ntTSL 316.11■□□□□ 0.172e-77■■■□□ 16.6
SND1Q7KZF4 ADTRP-208ENST00000512139 713 ntTSL 59.63□□□□□ -0.871e-7■■■□□ 16.6
SND1Q7KZF4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.387e-22■■■□□ 16.6
SND1Q7KZF4 ATP5G3-205ENST00000497075 1313 ntTSL 213.88□□□□□ -0.197e-22■■■□□ 16.6
SND1Q7KZF4 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.637e-22■■■□□ 16.6
SND1Q7KZF4 ATP5G3-203ENST00000409194 795 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.787e-22■■■□□ 16.6
SND1Q7KZF4 MOGS-204ENST00000448666 1616 ntTSL 1 (best)19.77■□□□□ 0.767e-8■■■□□ 16.6
SND1Q7KZF4 TMEM50A-206ENST00000498135 776 ntTSL 320.37■□□□□ 0.851e-7■■■□□ 16.6
SND1Q7KZF4 TMEM50A-203ENST00000480937 1102 ntTSL 219.68■□□□□ 0.741e-7■■■□□ 16.6
SND1Q7KZF4 TMEM50A-202ENST00000468704 799 ntTSL 317.75■□□□□ 0.431e-7■■■□□ 16.6
SND1Q7KZF4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.341e-7■■■□□ 16.6
SND1Q7KZF4 TMEM50A-205ENST00000491936 965 ntTSL 1 (best)15.88■□□□□ 0.131e-7■■■□□ 16.6
SND1Q7KZF4 FDFT1-213ENST00000528729 570 ntTSL 310.6□□□□□ -0.711e-10■■■□□ 16.6
SND1Q7KZF4 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.244e-7■■■□□ 16.6
SND1Q7KZF4 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.834e-7■■■□□ 16.6
SND1Q7KZF4 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.363e-6■■■□□ 16.6
SND1Q7KZF4 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.433e-6■■■□□ 16.6
SND1Q7KZF4 SERPINA10-203ENST00000554173 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.573e-6■■■□□ 16.6
SND1Q7KZF4 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.723e-6■■■□□ 16.6
SND1Q7KZF4 YIPF3-208ENST00000490447 1321 ntTSL 218.38■□□□□ 0.531e-7■■■□□ 16.6
SND1Q7KZF4 YIPF3-214ENST00000510102 1639 ntTSL 517.57■□□□□ 0.41e-7■■■□□ 16.6
SND1Q7KZF4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.11e-7■■■□□ 16.6
SND1Q7KZF4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.9□□□□□ -0.021e-7■■■□□ 16.6
SND1Q7KZF4 YIPF3-211ENST00000503147 652 ntTSL 212.84□□□□□ -0.351e-7■■■□□ 16.6
SND1Q7KZF4 HSP90B1-202ENST00000540297 590 ntTSL 320.56■□□□□ 0.886e-48■■■□□ 16.6
SND1Q7KZF4 LSR-206ENST00000597446 478 ntTSL 316.54■□□□□ 0.249e-52■■■□□ 16.5
SND1Q7KZF4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.858e-7■■■□□ 16.5
SND1Q7KZF4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.14■□□□□ 0.498e-7■■■□□ 16.5
SND1Q7KZF4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.15■□□□□ 0.188e-7■■■□□ 16.5
SND1Q7KZF4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.18■□□□□ 0.028e-7■■■□□ 16.5
SND1Q7KZF4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.17■□□□□ 0.028e-7■■■□□ 16.5
SND1Q7KZF4 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.328e-7■■■□□ 16.5
SND1Q7KZF4 SYNGR2-208ENST00000591770 864 ntTSL 216.6■□□□□ 0.256e-10■■■□□ 16.5
SND1Q7KZF4 RRM1-208ENST00000530368 332 ntTSL 58□□□□□ -1.131e-11■■■□□ 16.5
SND1Q7KZF4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.233e-6■■■□□ 16.5
SND1Q7KZF4 RRM1-203ENST00000526350 583 ntTSL 27.09□□□□□ -1.271e-11■■■□□ 16.5
SND1Q7KZF4 RRM1-204ENST00000526865 562 ntTSL 44.44□□□□□ -1.71e-11■■■□□ 16.5
SND1Q7KZF4 RRM1-211ENST00000532710 549 ntTSL 43.7□□□□□ -1.821e-11■■■□□ 16.5
SND1Q7KZF4 MXRA8-204ENST00000460473 339 ntTSL 226.37■■□□□ 1.814e-8■■■□□ 16.5
SND1Q7KZF4 ELOVL1-207ENST00000470968 867 ntTSL 519.23■□□□□ 0.673e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-206ENST00000470769 1215 ntTSL 216.3■□□□□ 0.23e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-203ENST00000464204 1034 ntTSL 1 (best)16.04■□□□□ 0.163e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-212ENST00000487209 828 ntTSL 215.4■□□□□ 0.063e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.033e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.23e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-215ENST00000497569 830 ntTSL 313.5□□□□□ -0.253e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC12.52□□□□□ -0.413e-7■■■□□ 16.5
SND1Q7KZF4 ELOVL1-205ENST00000468865 797 ntTSL 310.3□□□□□ -0.763e-7■■■□□ 16.5
SND1Q7KZF4 PSMA4-203ENST00000557929 635 ntTSL 513.49□□□□□ -0.251e-8■■■□□ 16.5
SND1Q7KZF4 NCEH1-204ENST00000475381 4687 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.571e-6■■■□□ 16.5
SND1Q7KZF4 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.71e-6■■■□□ 16.5
SND1Q7KZF4 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC9.34□□□□□ -0.911e-6■■■□□ 16.5
SND1Q7KZF4 CD63-216ENST00000555199 230 ntTSL 211.14□□□□□ -0.638e-24■■■□□ 16.5
SND1Q7KZF4 COL9A3-206ENST00000466532 539 ntTSL 219.75■□□□□ 0.755e-20■■■□□ 16.5
SND1Q7KZF4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.82■□□□□ 0.921e-6■■■□□ 16.5
SND1Q7KZF4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.09■□□□□ 0.811e-6■■■□□ 16.5
SND1Q7KZF4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.351e-6■■■□□ 16.5
SND1Q7KZF4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.191e-6■■■□□ 16.5
SND1Q7KZF4 ECE1-202ENST00000357071 3763 ntTSL 1 (best) BASIC12.13□□□□□ -0.471e-6■■■□□ 16.5
SND1Q7KZF4 SPTAN1-235ENST00000637434 1496 ntTSL 512.65□□□□□ -0.382e-8■■■□□ 16.5
SND1Q7KZF4 GAA-206ENST00000572803 575 ntTSL 216.71■□□□□ 0.279e-22■■■□□ 16.5
SND1Q7KZF4 PLOD3-208ENST00000460132 578 ntTSL 315.07■□□□□ 07e-8■■■□□ 16.4
SND1Q7KZF4 CLTC-208ENST00000496076 678 ntTSL 28.04□□□□□ -1.122e-6■■■□□ 16.4
SND1Q7KZF4 FDFT1-203ENST00000446331 1558 ntTSL 224.67■■□□□ 1.546e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.346e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.02■■□□□ 1.123e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.46■■□□□ 1.036e-8■■■□□ 16.4
Retrieved 100 of 13,567 protein–RNA pairs in 153.5 ms