RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
TMEM50A-202ENST00000468704 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
TMEM50A-202ENST00000468704 ABCC9O60706 1549 aa37.44■■■■□ 3.58
TMEM50A-202ENST00000468704 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
TMEM50A-202ENST00000468704 NACADO15069 1562 aa35.84■■■■□ 3.33
TMEM50A-202ENST00000468704 MYO15BQ96JP2 1530 aa35.5■■■■□ 3.27
TMEM50A-202ENST00000468704 DCAF8L2P0C7V8 631 aa35.47■■■■□ 3.27
TMEM50A-202ENST00000468704 ZCCHC6Q5VYS8 1495 aaKnown RBP35.39■■■■□ 3.26
TMEM50A-202ENST00000468704 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
TMEM50A-202ENST00000468704 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
TMEM50A-202ENST00000468704 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
TMEM50A-202ENST00000468704 PABPN1Q86U42 306 aaKnown RBP eCLIP34.8■■■■□ 3.16
TMEM50A-202ENST00000468704 SCRIBQ14160 1630 aa34.68■■■■□ 3.14
TMEM50A-202ENST00000468704 SHROOM4Q9ULL8 1493 aa34.53■■■■□ 3.12
TMEM50A-202ENST00000468704 DNAJC5BQ9UF47 199 aa34.51■■■■□ 3.12
TMEM50A-202ENST00000468704 EIF4G1Q04637 1599 aaKnown RBP33.99■■■■□ 3.03
TMEM50A-202ENST00000468704 CC2D2AQ9P2K1 1620 aa33.94■■■■□ 3.02
TMEM50A-202ENST00000468704 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
TMEM50A-202ENST00000468704 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
TMEM50A-202ENST00000468704 BAZ1AQ9NRL2 1556 aaPredicted RBP33.04■■■□□ 2.88
TMEM50A-202ENST00000468704 SMARCA2P51531 1590 aa32.99■■■□□ 2.87
TMEM50A-202ENST00000468704 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
TMEM50A-202ENST00000468704 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
TMEM50A-202ENST00000468704 HMGXB3Q12766 1538 aa32.91■■■□□ 2.86
TMEM50A-202ENST00000468704 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
TMEM50A-202ENST00000468704 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
TMEM50A-202ENST00000468704 BAZ1BQ9UIG0 1483 aaKnown RBP32.71■■■□□ 2.83
TMEM50A-202ENST00000468704 WIZO95785 1651 aa32.46■■■□□ 2.79
TMEM50A-202ENST00000468704 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
TMEM50A-202ENST00000468704 NESP48681 1621 aa32.3■■■□□ 2.76
TMEM50A-202ENST00000468704 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
TMEM50A-202ENST00000468704 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.75
TMEM50A-202ENST00000468704 CUX2O14529 1486 aa32.15■■■□□ 2.74
TMEM50A-202ENST00000468704 KIF21AQ7Z4S6 1674 aa32.1■■■□□ 2.73
TMEM50A-202ENST00000468704 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
TMEM50A-202ENST00000468704 THOC2Q8NI27 1593 aaKnown RBP32.03■■■□□ 2.72
TMEM50A-202ENST00000468704 CADPSQ9ULU8 1353 aa31.96■■■□□ 2.71
TMEM50A-202ENST00000468704 PDS5BQ9NTI5 1447 aa31.96■■■□□ 2.71
TMEM50A-202ENST00000468704 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
TMEM50A-202ENST00000468704 CFTRP13569 1480 aa31.75■■■□□ 2.67
TMEM50A-202ENST00000468704 MRC2Q9UBG0 1479 aa31.71■■■□□ 2.67
TMEM50A-202ENST00000468704 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
TMEM50A-202ENST00000468704 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
TMEM50A-202ENST00000468704 WDR62O43379 1518 aa31.66■■■□□ 2.66
TMEM50A-202ENST00000468704 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
TMEM50A-202ENST00000468704 DNAJC5Q9H3Z4 198 aa31.39■■■□□ 2.62
TMEM50A-202ENST00000468704 URB2Q14146 1524 aaKnown RBP31.38■■■□□ 2.61
TMEM50A-202ENST00000468704 TOPBP1Q92547 1522 aa31.14■■■□□ 2.57
TMEM50A-202ENST00000468704 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
TMEM50A-202ENST00000468704 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
TMEM50A-202ENST00000468704 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
TMEM50A-202ENST00000468704 IFT140Q96RY7 1462 aa31.01■■■□□ 2.56
TMEM50A-202ENST00000468704 TARBP1Q13395 1621 aaKnown RBP30.88■■■□□ 2.53
TMEM50A-202ENST00000468704 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
TMEM50A-202ENST00000468704 EIF4G3O43432 1585 aaKnown RBP30.88■■■□□ 2.53
TMEM50A-202ENST00000468704 POLA1P09884 1462 aaPredicted RBP30.83■■■□□ 2.53
TMEM50A-202ENST00000468704 CUX1P39880 1505 aa30.78■■■□□ 2.52
TMEM50A-202ENST00000468704 FGD5Q6ZNL6 1462 aa30.72■■■□□ 2.51
TMEM50A-202ENST00000468704 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
TMEM50A-202ENST00000468704 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
TMEM50A-202ENST00000468704 SOGA1O94964 1423 aa30.64■■■□□ 2.49
TMEM50A-202ENST00000468704 CHD1O14646 1710 aa30.62■■■□□ 2.49
TMEM50A-202ENST00000468704 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.493e-6■■□□□ 14.2
TMEM50A-202ENST00000468704 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
TMEM50A-202ENST00000468704 BIVM-ERCC5R4GMW8 1640 aa30.54■■■□□ 2.48
TMEM50A-202ENST00000468704 PBRM1Q86U86 1689 aa30.49■■■□□ 2.47
TMEM50A-202ENST00000468704 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
TMEM50A-202ENST00000468704 TDRD9Q8NDG6 1382 aaKnown RBP30.47■■■□□ 2.47
TMEM50A-202ENST00000468704 SYNJ1O43426 1573 aa30.44■■■□□ 2.46
TMEM50A-202ENST00000468704 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
TMEM50A-202ENST00000468704 ABCA5Q8WWZ7 1642 aa30.41■■■□□ 2.46
TMEM50A-202ENST00000468704 ABCA10Q8WWZ4 1543 aa30.41■■■□□ 2.46
TMEM50A-202ENST00000468704 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
TMEM50A-202ENST00000468704 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
TMEM50A-202ENST00000468704 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
TMEM50A-202ENST00000468704 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
TMEM50A-202ENST00000468704 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
TMEM50A-202ENST00000468704 RIMBP3Q9UFD9 1639 aa30.35■■■□□ 2.45
TMEM50A-202ENST00000468704 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
TMEM50A-202ENST00000468704 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
TMEM50A-202ENST00000468704 FBLN2P98095 1184 aa30.25■■■□□ 2.43
TMEM50A-202ENST00000468704 SYNJ2O15056 1496 aa30.24■■■□□ 2.43
TMEM50A-202ENST00000468704 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
TMEM50A-202ENST00000468704 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
TMEM50A-202ENST00000468704 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
TMEM50A-202ENST00000468704 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
TMEM50A-202ENST00000468704 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
TMEM50A-202ENST00000468704 GRIN2AQ12879 1464 aa30.01■■■□□ 2.4
TMEM50A-202ENST00000468704 ARAP1Q96P48 1450 aa29.96■■■□□ 2.39
TMEM50A-202ENST00000468704 FHAD1B1AJZ9 1412 aa29.96■■■□□ 2.39
TMEM50A-202ENST00000468704 CEP170Q5SW79 1584 aa29.91■■■□□ 2.38
TMEM50A-202ENST00000468704 NUP160Q12769 1436 aa29.88■■■□□ 2.37
TMEM50A-202ENST00000468704 CUL7Q14999 1698 aa29.82■■■□□ 2.36
TMEM50A-202ENST00000468704 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
TMEM50A-202ENST00000468704 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
TMEM50A-202ENST00000468704 SHROOM2Q13796 1616 aa29.79■■■□□ 2.36
TMEM50A-202ENST00000468704 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
TMEM50A-202ENST00000468704 ERCC6L2Q5T890 1561 aa29.68■■■□□ 2.34
TMEM50A-202ENST00000468704 IGF1RP08069 1367 aa29.64■■■□□ 2.33
TMEM50A-202ENST00000468704 PRG4Q92954 1404 aaPredicted RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms