RNA–Protein interactions for RNA: ENST00000525532.5

SORL1-204, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-204ENST00000525532 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
SORL1-204ENST00000525532 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.29
SORL1-204ENST00000525532 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.25
SORL1-204ENST00000525532 ABCC9O60706 1549 aa16.36■□□□□ 0.21
SORL1-204ENST00000525532 ZCCHC6Q5VYS8 1495 aaKnown RBP16.17■□□□□ 0.18
SORL1-204ENST00000525532 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
SORL1-204ENST00000525532 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
SORL1-204ENST00000525532 NACADO15069 1562 aa15.85■□□□□ 0.13
SORL1-204ENST00000525532 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
SORL1-204ENST00000525532 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.12
SORL1-204ENST00000525532 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
SORL1-204ENST00000525532 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.071e-7■□□□□ 8.9
SORL1-204ENST00000525532 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
SORL1-204ENST00000525532 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
SORL1-204ENST00000525532 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
SORL1-204ENST00000525532 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
SORL1-204ENST00000525532 BAZ1AQ9NRL2 1556 aaPredicted RBP15.01□□□□□ -0.01
SORL1-204ENST00000525532 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
SORL1-204ENST00000525532 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
SORL1-204ENST00000525532 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
SORL1-204ENST00000525532 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
SORL1-204ENST00000525532 WIZO95785 1651 aa14.77□□□□□ -0.04
SORL1-204ENST00000525532 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
SORL1-204ENST00000525532 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
SORL1-204ENST00000525532 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
SORL1-204ENST00000525532 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
SORL1-204ENST00000525532 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
SORL1-204ENST00000525532 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
SORL1-204ENST00000525532 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
SORL1-204ENST00000525532 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
SORL1-204ENST00000525532 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
SORL1-204ENST00000525532 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
SORL1-204ENST00000525532 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
SORL1-204ENST00000525532 CHIC1Q5VXU3 224 aa14.44□□□□□ -0.1
SORL1-204ENST00000525532 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
SORL1-204ENST00000525532 FAM9AQ8IZU1 332 aaPredicted RBP14.26□□□□□ -0.13
SORL1-204ENST00000525532 CFTRP13569 1480 aa14.26□□□□□ -0.13
SORL1-204ENST00000525532 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
SORL1-204ENST00000525532 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
SORL1-204ENST00000525532 NESP48681 1621 aa14.2□□□□□ -0.14
SORL1-204ENST00000525532 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
SORL1-204ENST00000525532 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
SORL1-204ENST00000525532 ERCC6Q03468 1493 aa14.17□□□□□ -0.14
SORL1-204ENST00000525532 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
SORL1-204ENST00000525532 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
SORL1-204ENST00000525532 HRCP23327 699 aa14.13□□□□□ -0.15
SORL1-204ENST00000525532 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
SORL1-204ENST00000525532 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
SORL1-204ENST00000525532 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
SORL1-204ENST00000525532 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
SORL1-204ENST00000525532 CUX1P39880 1505 aa13.97□□□□□ -0.17
SORL1-204ENST00000525532 UBTFP17480 764 aaKnown RBP13.96□□□□□ -0.17
SORL1-204ENST00000525532 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.17
SORL1-204ENST00000525532 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.18
SORL1-204ENST00000525532 LOC105371045A0A1W2PR82 267 aa13.95□□□□□ -0.18
SORL1-204ENST00000525532 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
SORL1-204ENST00000525532 SOGA1O94964 1423 aa13.94□□□□□ -0.18
SORL1-204ENST00000525532 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
SORL1-204ENST00000525532 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
SORL1-204ENST00000525532 EEA1Q15075 1411 aa13.93□□□□□ -0.18
SORL1-204ENST00000525532 KIF27Q86VH2 1401 aa13.93□□□□□ -0.18
SORL1-204ENST00000525532 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
SORL1-204ENST00000525532 CUX2O14529 1486 aa13.91□□□□□ -0.18
SORL1-204ENST00000525532 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
SORL1-204ENST00000525532 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
SORL1-204ENST00000525532 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
SORL1-204ENST00000525532 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
SORL1-204ENST00000525532 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
SORL1-204ENST00000525532 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
SORL1-204ENST00000525532 RANGAP1P46060 587 aaPredicted RBP13.84□□□□□ -0.19
SORL1-204ENST00000525532 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
SORL1-204ENST00000525532 FBLN2P98095 1184 aa13.79□□□□□ -0.2
SORL1-204ENST00000525532 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
SORL1-204ENST00000525532 WDR62O43379 1518 aa13.76□□□□□ -0.21
SORL1-204ENST00000525532 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
SORL1-204ENST00000525532 CARMIL1Q5VZK9 1371 aa13.75□□□□□ -0.21
SORL1-204ENST00000525532 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
SORL1-204ENST00000525532 GOLGA3Q08378 1498 aa13.74□□□□□ -0.21
SORL1-204ENST00000525532 PCGF6Q9BYE7 350 aa13.73□□□□□ -0.21
SORL1-204ENST00000525532 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■■■□ 24.8
SORL1-204ENST00000525532 IGF1RP08069 1367 aa13.72□□□□□ -0.21
SORL1-204ENST00000525532 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
SORL1-204ENST00000525532 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.22
SORL1-204ENST00000525532 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
SORL1-204ENST00000525532 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
SORL1-204ENST00000525532 RAPGEF2Q9Y4G8 1499 aa13.65□□□□□ -0.22
SORL1-204ENST00000525532 ZNF608Q9ULD9 1512 aaPredicted RBP13.65□□□□□ -0.22
SORL1-204ENST00000525532 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
SORL1-204ENST00000525532 APLP2Q06481 763 aa13.63□□□□□ -0.23
SORL1-204ENST00000525532 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
SORL1-204ENST00000525532 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
SORL1-204ENST00000525532 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
SORL1-204ENST00000525532 KIF21BO75037 1637 aa13.59□□□□□ -0.23
SORL1-204ENST00000525532 FHAD1B1AJZ9 1412 aa13.59□□□□□ -0.23
SORL1-204ENST00000525532 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
SORL1-204ENST00000525532 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
SORL1-204ENST00000525532 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
SORL1-204ENST00000525532 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
SORL1-204ENST00000525532 CLIP1P30622 1438 aa13.56□□□□□ -0.24
SORL1-204ENST00000525532 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms