RNA–Protein interactions for RNA: ENST00000555199.1

CD63-216, Transcript of CD63 molecule, humanhuman

TSL 2

Gene CD63, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD63-216ENST00000555199 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.57
CD63-216ENST00000555199 ABCC9O60706 1549 aa22.31■■□□□ 1.16
CD63-216ENST00000555199 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
CD63-216ENST00000555199 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
CD63-216ENST00000555199 DNAJC5Q9H3Z4 198 aa20.9■□□□□ 0.94
CD63-216ENST00000555199 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
CD63-216ENST00000555199 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
CD63-216ENST00000555199 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
CD63-216ENST00000555199 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
CD63-216ENST00000555199 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.9
CD63-216ENST00000555199 NACADO15069 1562 aa20.56■□□□□ 0.88
CD63-216ENST00000555199 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
CD63-216ENST00000555199 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
CD63-216ENST00000555199 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
CD63-216ENST00000555199 BICRAQ9NZM4 1560 aa20.16■□□□□ 0.82
CD63-216ENST00000555199 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
CD63-216ENST00000555199 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
CD63-216ENST00000555199 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
CD63-216ENST00000555199 EIF4G1Q04637 1599 aaKnown RBP19.82■□□□□ 0.76
CD63-216ENST00000555199 CUX2O14529 1486 aa19.74■□□□□ 0.75
CD63-216ENST00000555199 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
CD63-216ENST00000555199 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
CD63-216ENST00000555199 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
CD63-216ENST00000555199 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
CD63-216ENST00000555199 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
CD63-216ENST00000555199 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
CD63-216ENST00000555199 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
CD63-216ENST00000555199 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
CD63-216ENST00000555199 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
CD63-216ENST00000555199 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
CD63-216ENST00000555199 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
CD63-216ENST00000555199 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
CD63-216ENST00000555199 WIZO95785 1651 aa18.89■□□□□ 0.61
CD63-216ENST00000555199 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
CD63-216ENST00000555199 THOC2Q8NI27 1593 aaKnown RBP18.83■□□□□ 0.6
CD63-216ENST00000555199 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
CD63-216ENST00000555199 NESP48681 1621 aa18.82■□□□□ 0.6
CD63-216ENST00000555199 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
CD63-216ENST00000555199 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
CD63-216ENST00000555199 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
CD63-216ENST00000555199 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.58
CD63-216ENST00000555199 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
CD63-216ENST00000555199 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.56
CD63-216ENST00000555199 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
CD63-216ENST00000555199 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
CD63-216ENST00000555199 WDR62O43379 1518 aa18.42■□□□□ 0.54
CD63-216ENST00000555199 RIMBP3CA6NJZ7 1639 aa18.41■□□□□ 0.54
CD63-216ENST00000555199 RIMBP3BA6NNM3 1639 aa18.41■□□□□ 0.54
CD63-216ENST00000555199 RIMBP3Q9UFD9 1639 aa18.41■□□□□ 0.54
CD63-216ENST00000555199 CADPSQ9ULU8 1353 aa18.41■□□□□ 0.54
CD63-216ENST00000555199 CFTRP13569 1480 aa18.4■□□□□ 0.54
CD63-216ENST00000555199 CYB5RLQ6IPT4 315 aa18.33■□□□□ 0.52
CD63-216ENST00000555199 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
CD63-216ENST00000555199 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
CD63-216ENST00000555199 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
CD63-216ENST00000555199 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
CD63-216ENST00000555199 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
CD63-216ENST00000555199 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
CD63-216ENST00000555199 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
CD63-216ENST00000555199 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
CD63-216ENST00000555199 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
CD63-216ENST00000555199 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
CD63-216ENST00000555199 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
CD63-216ENST00000555199 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
CD63-216ENST00000555199 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
CD63-216ENST00000555199 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
CD63-216ENST00000555199 CUX1P39880 1505 aa17.91■□□□□ 0.46
CD63-216ENST00000555199 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
CD63-216ENST00000555199 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
CD63-216ENST00000555199 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
CD63-216ENST00000555199 FBLN2P98095 1184 aa17.82■□□□□ 0.44
CD63-216ENST00000555199 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
CD63-216ENST00000555199 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
CD63-216ENST00000555199 SOGA1O94964 1423 aa17.74■□□□□ 0.43
CD63-216ENST00000555199 EEA1Q15075 1411 aa17.74■□□□□ 0.43
CD63-216ENST00000555199 CHD1O14646 1710 aa17.72■□□□□ 0.43
CD63-216ENST00000555199 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
CD63-216ENST00000555199 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
CD63-216ENST00000555199 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
CD63-216ENST00000555199 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
CD63-216ENST00000555199 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
CD63-216ENST00000555199 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.413e-7■■■■□ 22.9
CD63-216ENST00000555199 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
CD63-216ENST00000555199 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
CD63-216ENST00000555199 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
CD63-216ENST00000555199 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
CD63-216ENST00000555199 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
CD63-216ENST00000555199 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
CD63-216ENST00000555199 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
CD63-216ENST00000555199 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
CD63-216ENST00000555199 IGF1RP08069 1367 aa17.51■□□□□ 0.39
CD63-216ENST00000555199 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
CD63-216ENST00000555199 KDM4FA0A1W2PPD8 638 aa17.48■□□□□ 0.39
CD63-216ENST00000555199 RUSC2Q8N2Y8 1516 aa17.47■□□□□ 0.39
CD63-216ENST00000555199 CUL7Q14999 1698 aa17.45■□□□□ 0.38
CD63-216ENST00000555199 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
CD63-216ENST00000555199 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
CD63-216ENST00000555199 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
CD63-216ENST00000555199 KIF21BO75037 1637 aa17.4■□□□□ 0.38
CD63-216ENST00000555199 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms