RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-208ENST00000460132 NISCHQ9Y2I1 1504 aa35.94■■■■□ 3.34
PLOD3-208ENST00000460132 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
PLOD3-208ENST00000460132 ABCC9O60706 1549 aa31.7■■■□□ 2.67
PLOD3-208ENST00000460132 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
PLOD3-208ENST00000460132 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
PLOD3-208ENST00000460132 NACADO15069 1562 aa30.2■■■□□ 2.43
PLOD3-208ENST00000460132 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
PLOD3-208ENST00000460132 ZCCHC6Q5VYS8 1495 aaKnown RBP29.85■■■□□ 2.37
PLOD3-208ENST00000460132 DCAF1Q9Y4B6 1507 aa29.68■■■□□ 2.34
PLOD3-208ENST00000460132 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
PLOD3-208ENST00000460132 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
PLOD3-208ENST00000460132 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
PLOD3-208ENST00000460132 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
PLOD3-208ENST00000460132 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
PLOD3-208ENST00000460132 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
PLOD3-208ENST00000460132 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
PLOD3-208ENST00000460132 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
PLOD3-208ENST00000460132 CECR2Q9BXF3 1484 aa28.52■■■□□ 2.16
PLOD3-208ENST00000460132 NCAPD3P42695 1498 aa27.92■■■□□ 2.06
PLOD3-208ENST00000460132 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
PLOD3-208ENST00000460132 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.05
PLOD3-208ENST00000460132 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
PLOD3-208ENST00000460132 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
PLOD3-208ENST00000460132 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
PLOD3-208ENST00000460132 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
PLOD3-208ENST00000460132 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
PLOD3-208ENST00000460132 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
PLOD3-208ENST00000460132 WIZO95785 1651 aa27.37■■□□□ 1.97
PLOD3-208ENST00000460132 NESP48681 1621 aa27.36■■□□□ 1.97
PLOD3-208ENST00000460132 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
PLOD3-208ENST00000460132 RSF1Q96T23 1441 aaPredicted RBP27.31■■□□□ 1.96
PLOD3-208ENST00000460132 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
PLOD3-208ENST00000460132 CUX2O14529 1486 aa27.12■■□□□ 1.93
PLOD3-208ENST00000460132 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
PLOD3-208ENST00000460132 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
PLOD3-208ENST00000460132 TOP2AP11388 1531 aaKnown RBP27.05■■□□□ 1.92
PLOD3-208ENST00000460132 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.9
PLOD3-208ENST00000460132 THOC2Q8NI27 1593 aaKnown RBP26.93■■□□□ 1.9
PLOD3-208ENST00000460132 CFTRP13569 1480 aa26.86■■□□□ 1.89
PLOD3-208ENST00000460132 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
PLOD3-208ENST00000460132 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
PLOD3-208ENST00000460132 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
PLOD3-208ENST00000460132 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
PLOD3-208ENST00000460132 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
PLOD3-208ENST00000460132 WDR62O43379 1518 aa26.68■■□□□ 1.86
PLOD3-208ENST00000460132 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
PLOD3-208ENST00000460132 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
PLOD3-208ENST00000460132 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
PLOD3-208ENST00000460132 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
PLOD3-208ENST00000460132 ABCC8Q09428 1581 aa26.26■■□□□ 1.79
PLOD3-208ENST00000460132 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
PLOD3-208ENST00000460132 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
PLOD3-208ENST00000460132 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
PLOD3-208ENST00000460132 POLA1P09884 1462 aaPredicted RBP26.06■■□□□ 1.76
PLOD3-208ENST00000460132 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
PLOD3-208ENST00000460132 TARBP1Q13395 1621 aaKnown RBP26.02■■□□□ 1.76
PLOD3-208ENST00000460132 CUX1P39880 1505 aa26■■□□□ 1.75
PLOD3-208ENST00000460132 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
PLOD3-208ENST00000460132 AQRO60306 1485 aaKnown RBP eCLIP25.98■■□□□ 1.753e-8■■■■■ 32.2
PLOD3-208ENST00000460132 SOGA1O94964 1423 aa25.98■■□□□ 1.75
PLOD3-208ENST00000460132 EIF4G3O43432 1585 aaKnown RBP25.96■■□□□ 1.75
PLOD3-208ENST00000460132 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
PLOD3-208ENST00000460132 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
PLOD3-208ENST00000460132 FBLN2P98095 1184 aa25.76■■□□□ 1.71
PLOD3-208ENST00000460132 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
PLOD3-208ENST00000460132 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
PLOD3-208ENST00000460132 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
PLOD3-208ENST00000460132 SNAPC4Q5SXM2 1469 aa25.69■■□□□ 1.7
PLOD3-208ENST00000460132 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
PLOD3-208ENST00000460132 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
PLOD3-208ENST00000460132 CHD1O14646 1710 aa25.68■■□□□ 1.7
PLOD3-208ENST00000460132 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
PLOD3-208ENST00000460132 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
PLOD3-208ENST00000460132 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
PLOD3-208ENST00000460132 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.7
PLOD3-208ENST00000460132 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
PLOD3-208ENST00000460132 CHMP7Q8WUX9 453 aaPredicted RBP25.62■■□□□ 1.69
PLOD3-208ENST00000460132 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
PLOD3-208ENST00000460132 RIMBP3CA6NJZ7 1639 aa25.56■■□□□ 1.68
PLOD3-208ENST00000460132 RIMBP3BA6NNM3 1639 aa25.56■■□□□ 1.68
PLOD3-208ENST00000460132 RIMBP3Q9UFD9 1639 aa25.56■■□□□ 1.68
PLOD3-208ENST00000460132 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
PLOD3-208ENST00000460132 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
PLOD3-208ENST00000460132 PBRM1Q86U86 1689 aa25.54■■□□□ 1.68
PLOD3-208ENST00000460132 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
PLOD3-208ENST00000460132 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
PLOD3-208ENST00000460132 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
PLOD3-208ENST00000460132 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
PLOD3-208ENST00000460132 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
PLOD3-208ENST00000460132 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
PLOD3-208ENST00000460132 ARAP1Q96P48 1450 aa25.33■■□□□ 1.65
PLOD3-208ENST00000460132 NUP160Q12769 1436 aa25.25■■□□□ 1.63
PLOD3-208ENST00000460132 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
PLOD3-208ENST00000460132 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
PLOD3-208ENST00000460132 IGF1RP08069 1367 aa25.2■■□□□ 1.63
PLOD3-208ENST00000460132 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
PLOD3-208ENST00000460132 SHROOM2Q13796 1616 aa25.06■■□□□ 1.6
PLOD3-208ENST00000460132 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
PLOD3-208ENST00000460132 CUL7Q14999 1698 aa25.03■■□□□ 1.6
PLOD3-208ENST00000460132 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms