RNA–Protein interactions for RNA: ENST00000498135.5

TMEM50A-206, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 776 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-206ENST00000498135 NISCHQ9Y2I1 1504 aa50.6■■■■■ 5.69
TMEM50A-206ENST00000498135 ABCC9O60706 1549 aa47.23■■■■■ 5.15
TMEM50A-206ENST00000498135 CCDC180Q9P1Z9 1646 aa45.98■■■■■ 4.95
TMEM50A-206ENST00000498135 DNAJC5BQ9UF47 199 aa45.37■■■■■ 4.85
TMEM50A-206ENST00000498135 RB1CC1Q8TDY2 1594 aa44.4■■■■■ 4.7
TMEM50A-206ENST00000498135 NACADO15069 1562 aa43.77■■■■■ 4.6
TMEM50A-206ENST00000498135 PABPN1Q86U42 306 aaKnown RBP eCLIP43.75■■■■■ 4.59
TMEM50A-206ENST00000498135 UNC13AQ9UPW8 1703 aa43.34■■■■■ 4.53
TMEM50A-206ENST00000498135 DCAF8L2P0C7V8 631 aa43.3■■■■■ 4.52
TMEM50A-206ENST00000498135 BICRAQ9NZM4 1560 aa43.11■■■■■ 4.49
TMEM50A-206ENST00000498135 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
TMEM50A-206ENST00000498135 CECR2Q9BXF3 1484 aa42.68■■■■■ 4.42
TMEM50A-206ENST00000498135 DNAJC5Q9H3Z4 198 aa42.62■■■■■ 4.41
TMEM50A-206ENST00000498135 CC2D2AQ9P2K1 1620 aa42.58■■■■■ 4.41
TMEM50A-206ENST00000498135 SHROOM4Q9ULL8 1493 aa42.44■■■■■ 4.38
TMEM50A-206ENST00000498135 EIF4G1Q04637 1599 aaKnown RBP42.18■■■■■ 4.34
TMEM50A-206ENST00000498135 SCRIBQ14160 1630 aa41.83■■■■■ 4.29
TMEM50A-206ENST00000498135 DCAF1Q9Y4B6 1507 aa41.71■■■■■ 4.27
TMEM50A-206ENST00000498135 ZCCHC6Q5VYS8 1495 aaKnown RBP41.67■■■■■ 4.26
TMEM50A-206ENST00000498135 CUX2O14529 1486 aa41.23■■■■■ 4.19
TMEM50A-206ENST00000498135 ERCC6Q03468 1493 aa40.9■■■■■ 4.14
TMEM50A-206ENST00000498135 NCAPD3P42695 1498 aa40.41■■■■■ 4.06
TMEM50A-206ENST00000498135 TRIM41Q8WV44 630 aa40.28■■■■■ 4.04
TMEM50A-206ENST00000498135 NESP48681 1621 aa40.19■■■■■ 4.02
TMEM50A-206ENST00000498135 ATAD2BQ9ULI0 1458 aa40.12■■■■■ 4.01
TMEM50A-206ENST00000498135 THOC2Q8NI27 1593 aaKnown RBP40.05■■■■■ 4
TMEM50A-206ENST00000498135 HMGXB3Q12766 1538 aa40.01■■■■■ 4
TMEM50A-206ENST00000498135 SMARCA2P51531 1590 aa39.95■■■■□ 3.99
TMEM50A-206ENST00000498135 SMARCA4P51532 1647 aa39.76■■■■□ 3.95
TMEM50A-206ENST00000498135 LAMC3Q9Y6N6 1575 aa39.72■■■■□ 3.95
TMEM50A-206ENST00000498135 BAZ1BQ9UIG0 1483 aaKnown RBP39.68■■■■□ 3.94
TMEM50A-206ENST00000498135 KIF21AQ7Z4S6 1674 aa39.63■■■■□ 3.93
TMEM50A-206ENST00000498135 PDS5BQ9NTI5 1447 aa39.55■■■■□ 3.92
TMEM50A-206ENST00000498135 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.9
TMEM50A-206ENST00000498135 PEG3Q9GZU2 1588 aa39.36■■■■□ 3.89
TMEM50A-206ENST00000498135 MRC2Q9UBG0 1479 aa39.29■■■■□ 3.88
TMEM50A-206ENST00000498135 WDR62O43379 1518 aa39.21■■■■□ 3.87
TMEM50A-206ENST00000498135 CADPSQ9ULU8 1353 aa39.13■■■■□ 3.85
TMEM50A-206ENST00000498135 OSCARQ8IYS5 282 aa39.12■■■■□ 3.85
TMEM50A-206ENST00000498135 MROH2BQ7Z745 1585 aa38.97■■■■□ 3.83
TMEM50A-206ENST00000498135 CEP164Q9UPV0 1460 aa38.88■■■■□ 3.81
TMEM50A-206ENST00000498135 RIMBP3CA6NJZ7 1639 aa38.76■■■■□ 3.8
TMEM50A-206ENST00000498135 RIMBP3BA6NNM3 1639 aa38.76■■■■□ 3.8
TMEM50A-206ENST00000498135 RIMBP3Q9UFD9 1639 aa38.76■■■■□ 3.8
TMEM50A-206ENST00000498135 FANCD2Q9BXW9 1451 aa38.71■■■■□ 3.79
TMEM50A-206ENST00000498135 ARHGEF11O15085 1522 aa38.51■■■■□ 3.76
TMEM50A-206ENST00000498135 URB2Q14146 1524 aaKnown RBP38.45■■■■□ 3.75
TMEM50A-206ENST00000498135 WIZO95785 1651 aa38.44■■■■□ 3.74
TMEM50A-206ENST00000498135 CFTRP13569 1480 aa38.41■■■■□ 3.74
TMEM50A-206ENST00000498135 TRHP20396 242 aaPredicted RBP38.33■■■■□ 3.73
TMEM50A-206ENST00000498135 CYB5RLQ6IPT4 315 aa38.3■■■■□ 3.72
TMEM50A-206ENST00000498135 ZNF608Q9ULD9 1512 aaPredicted RBP38.18■■■■□ 3.7
TMEM50A-206ENST00000498135 AEBP2Q6ZN18 517 aaPredicted RBP38.17■■■■□ 3.7
TMEM50A-206ENST00000498135 IFT140Q96RY7 1462 aa38.14■■■■□ 3.7
TMEM50A-206ENST00000498135 ARAP1Q96P48 1450 aa38.04■■■■□ 3.68
TMEM50A-206ENST00000498135 EIF4G3O43432 1585 aaKnown RBP37.93■■■■□ 3.66
TMEM50A-206ENST00000498135 PRDM2Q13029 1718 aa37.92■■■■□ 3.66
TMEM50A-206ENST00000498135 TOP2AP11388 1531 aaKnown RBP37.89■■■■□ 3.66
TMEM50A-206ENST00000498135 CHD1O14646 1710 aa37.87■■■■□ 3.65
TMEM50A-206ENST00000498135 RSF1Q96T23 1441 aaPredicted RBP37.86■■■■□ 3.65
TMEM50A-206ENST00000498135 TOPBP1Q92547 1522 aa37.82■■■■□ 3.65
TMEM50A-206ENST00000498135 FBLN2P98095 1184 aa37.73■■■■□ 3.63
TMEM50A-206ENST00000498135 AQRO60306 1485 aaKnown RBP eCLIP37.68■■■■□ 3.623e-6■■□□□ 14.2
TMEM50A-206ENST00000498135 ABCC8Q09428 1581 aa37.67■■■■□ 3.62
TMEM50A-206ENST00000498135 DNMBPQ6XZF7 1577 aa37.58■■■■□ 3.61
TMEM50A-206ENST00000498135 TARBP1Q13395 1621 aaKnown RBP37.57■■■■□ 3.6
TMEM50A-206ENST00000498135 CCDC88BA6NC98 1476 aa37.45■■■■□ 3.59
TMEM50A-206ENST00000498135 CLASP1Q7Z460 1538 aa37.41■■■■□ 3.58
TMEM50A-206ENST00000498135 POLA1P09884 1462 aaPredicted RBP37.36■■■■□ 3.57
TMEM50A-206ENST00000498135 SYNJ1O43426 1573 aa37.3■■■■□ 3.56
TMEM50A-206ENST00000498135 SNAPC4Q5SXM2 1469 aa37.28■■■■□ 3.56
TMEM50A-206ENST00000498135 TDRD9Q8NDG6 1382 aaKnown RBP37.26■■■■□ 3.55
TMEM50A-206ENST00000498135 RAD54L2Q9Y4B4 1467 aa37.24■■■■□ 3.55
TMEM50A-206ENST00000498135 CHMP7Q8WUX9 453 aaPredicted RBP37.23■■■■□ 3.55
TMEM50A-206ENST00000498135 SOGA1O94964 1423 aa37.17■■■■□ 3.54
TMEM50A-206ENST00000498135 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.54
TMEM50A-206ENST00000498135 MAGI1Q96QZ7 1491 aaPredicted RBP37.13■■■■□ 3.53
TMEM50A-206ENST00000498135 WDR97A6NE52 1622 aa37.12■■■■□ 3.53
TMEM50A-206ENST00000498135 SYNJ2O15056 1496 aa37.02■■■■□ 3.52
TMEM50A-206ENST00000498135 GRIN2BQ13224 1484 aa37.01■■■■□ 3.51
TMEM50A-206ENST00000498135 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
TMEM50A-206ENST00000498135 PBRM1Q86U86 1689 aa36.76■■■■□ 3.47
TMEM50A-206ENST00000498135 ERCC6L2Q5T890 1561 aa36.73■■■■□ 3.47
TMEM50A-206ENST00000498135 CUX1P39880 1505 aa36.69■■■■□ 3.46
TMEM50A-206ENST00000498135 KIF13AQ9H1H9 1805 aa36.63■■■■□ 3.45
TMEM50A-206ENST00000498135 ILDR1Q86SU0 546 aaPredicted RBP36.62■■■■□ 3.45
TMEM50A-206ENST00000498135 CEP170Q5SW79 1584 aa36.57■■■■□ 3.44
TMEM50A-206ENST00000498135 GRIN2AQ12879 1464 aa36.52■■■■□ 3.44
TMEM50A-206ENST00000498135 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
TMEM50A-206ENST00000498135 ABCA10Q8WWZ4 1543 aa36.44■■■■□ 3.42
TMEM50A-206ENST00000498135 NUP160Q12769 1436 aa36.43■■■■□ 3.42
TMEM50A-206ENST00000498135 SHROOM2Q13796 1616 aa36.41■■■■□ 3.42
TMEM50A-206ENST00000498135 KDM4FA0A1W2PPD8 638 aa36.38■■■■□ 3.41
TMEM50A-206ENST00000498135 FAM69CQ0P6D2 419 aa36.34■■■■□ 3.41
TMEM50A-206ENST00000498135 ADAMTS12P58397 1594 aa36.34■■■■□ 3.41
TMEM50A-206ENST00000498135 ABCC10Q5T3U5 1492 aa36.3■■■■□ 3.4
TMEM50A-206ENST00000498135 KDM6BO15054 1643 aa36.23■■■■□ 3.39
TMEM50A-206ENST00000498135 PRG4Q92954 1404 aaPredicted RBP36.2■■■■□ 3.39
TMEM50A-206ENST00000498135 FHAD1B1AJZ9 1412 aa36.18■■■■□ 3.38
TMEM50A-206ENST00000498135 NPM1P06748 294 aaKnown RBP eCLIP36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms