Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PTPN22Q9Y2R2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PTPN22Q9Y2R2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.65■■■□□ 2.5
PTPN22Q9Y2R2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.65■■■□□ 2.5
PTPN22Q9Y2R2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.65■■■□□ 2.5
PTPN22Q9Y2R2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PTPN22Q9Y2R2 GPX1-201ENST00000419349 1106 ntBASIC30.63■■■□□ 2.49
PTPN22Q9Y2R2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PTPN22Q9Y2R2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PTPN22Q9Y2R2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PTPN22Q9Y2R2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
PTPN22Q9Y2R2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.61■■■□□ 2.49
PTPN22Q9Y2R2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.6■■■□□ 2.49
PTPN22Q9Y2R2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.6■■■□□ 2.49
PTPN22Q9Y2R2 RNF126P1-201ENST00000567452 1320 ntBASIC30.6■■■□□ 2.49
PTPN22Q9Y2R2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
PTPN22Q9Y2R2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PTPN22Q9Y2R2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PTPN22Q9Y2R2 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.57■■■□□ 2.48
PTPN22Q9Y2R2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
PTPN22Q9Y2R2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PTPN22Q9Y2R2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.56■■■□□ 2.48
PTPN22Q9Y2R2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PTPN22Q9Y2R2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.55■■■□□ 2.48
PTPN22Q9Y2R2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PTPN22Q9Y2R2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
PTPN22Q9Y2R2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
PTPN22Q9Y2R2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
PTPN22Q9Y2R2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PTPN22Q9Y2R2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.52■■■□□ 2.48
PTPN22Q9Y2R2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PTPN22Q9Y2R2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PTPN22Q9Y2R2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.48
PTPN22Q9Y2R2 AC012354.3-201ENST00000623734 483 ntBASIC30.49■■■□□ 2.47
PTPN22Q9Y2R2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PTPN22Q9Y2R2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PTPN22Q9Y2R2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.47■■■□□ 2.47
PTPN22Q9Y2R2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
PTPN22Q9Y2R2 NTF6A-201ENST00000591175 560 ntBASIC30.46■■■□□ 2.47
PTPN22Q9Y2R2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.45■■■□□ 2.47
PTPN22Q9Y2R2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
PTPN22Q9Y2R2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
PTPN22Q9Y2R2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PTPN22Q9Y2R2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
PTPN22Q9Y2R2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
PTPN22Q9Y2R2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN22Q9Y2R2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.39■■■□□ 2.46
PTPN22Q9Y2R2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN22Q9Y2R2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN22Q9Y2R2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
PTPN22Q9Y2R2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN22Q9Y2R2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.36■■■□□ 2.45
PTPN22Q9Y2R2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.36■■■□□ 2.45
PTPN22Q9Y2R2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
PTPN22Q9Y2R2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.35■■■□□ 2.45
PTPN22Q9Y2R2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
PTPN22Q9Y2R2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.35■■■□□ 2.45
PTPN22Q9Y2R2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PTPN22Q9Y2R2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
PTPN22Q9Y2R2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PTPN22Q9Y2R2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PTPN22Q9Y2R2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.33■■■□□ 2.45
PTPN22Q9Y2R2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
PTPN22Q9Y2R2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
PTPN22Q9Y2R2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.31■■■□□ 2.44
PTPN22Q9Y2R2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN22Q9Y2R2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
PTPN22Q9Y2R2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN22Q9Y2R2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
PTPN22Q9Y2R2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN22Q9Y2R2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
PTPN22Q9Y2R2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.29■■■□□ 2.44
PTPN22Q9Y2R2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
PTPN22Q9Y2R2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN22Q9Y2R2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPN22Q9Y2R2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.28■■■□□ 2.44
PTPN22Q9Y2R2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.28■■■□□ 2.44
PTPN22Q9Y2R2 AC018358.1-201ENST00000631079 1402 ntBASIC30.28■■■□□ 2.44
PTPN22Q9Y2R2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PTPN22Q9Y2R2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.26■■■□□ 2.43
PTPN22Q9Y2R2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.26■■■□□ 2.43
PTPN22Q9Y2R2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PTPN22Q9Y2R2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PTPN22Q9Y2R2 AL033527.3-201ENST00000566366 1196 ntBASIC30.25■■■□□ 2.43
PTPN22Q9Y2R2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PTPN22Q9Y2R2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
PTPN22Q9Y2R2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.24■■■□□ 2.43
PTPN22Q9Y2R2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PTPN22Q9Y2R2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PTPN22Q9Y2R2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.23■■■□□ 2.43
PTPN22Q9Y2R2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
PTPN22Q9Y2R2 AC022413.1-201ENST00000624602 984 ntBASIC30.22■■■□□ 2.43
PTPN22Q9Y2R2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PTPN22Q9Y2R2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
PTPN22Q9Y2R2 AC008813.1-201ENST00000536597 885 ntBASIC30.21■■■□□ 2.43
PTPN22Q9Y2R2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PTPN22Q9Y2R2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
PTPN22Q9Y2R2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.17■■■□□ 2.42
PTPN22Q9Y2R2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms