Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RNF126P1-201ENST00000567452 1320 ntBASIC26.56■■□□□ 1.84
NCDNQ9UBB6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCDNQ9UBB6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.54■■□□□ 1.84
NCDNQ9UBB6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NCDNQ9UBB6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.53■■□□□ 1.84
NCDNQ9UBB6 AC012354.3-201ENST00000623734 483 ntBASIC26.53■■□□□ 1.84
NCDNQ9UBB6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NCDNQ9UBB6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NCDNQ9UBB6 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.52■■□□□ 1.84
NCDNQ9UBB6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NCDNQ9UBB6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NCDNQ9UBB6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NCDNQ9UBB6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NCDNQ9UBB6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NCDNQ9UBB6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NCDNQ9UBB6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
NCDNQ9UBB6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NCDNQ9UBB6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.48■■□□□ 1.83
NCDNQ9UBB6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCDNQ9UBB6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCDNQ9UBB6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.47■■□□□ 1.83
NCDNQ9UBB6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
NCDNQ9UBB6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NCDNQ9UBB6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NCDNQ9UBB6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NCDNQ9UBB6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NCDNQ9UBB6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NCDNQ9UBB6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.46■■□□□ 1.83
NCDNQ9UBB6 NTF6A-201ENST00000591175 560 ntBASIC26.46■■□□□ 1.83
NCDNQ9UBB6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
NCDNQ9UBB6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
NCDNQ9UBB6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.44■■□□□ 1.82
NCDNQ9UBB6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NCDNQ9UBB6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
NCDNQ9UBB6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
NCDNQ9UBB6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.43■■□□□ 1.82
NCDNQ9UBB6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
NCDNQ9UBB6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
NCDNQ9UBB6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
NCDNQ9UBB6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
NCDNQ9UBB6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.42■■□□□ 1.82
NCDNQ9UBB6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NCDNQ9UBB6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
NCDNQ9UBB6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.41■■□□□ 1.82
NCDNQ9UBB6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
NCDNQ9UBB6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.39■■□□□ 1.82
NCDNQ9UBB6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NCDNQ9UBB6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
NCDNQ9UBB6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.37■■□□□ 1.81
NCDNQ9UBB6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
NCDNQ9UBB6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.35■■□□□ 1.81
NCDNQ9UBB6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NCDNQ9UBB6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
NCDNQ9UBB6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NCDNQ9UBB6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NCDNQ9UBB6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.33■■□□□ 1.81
NCDNQ9UBB6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.33■■□□□ 1.81
NCDNQ9UBB6 AC018358.1-201ENST00000631079 1402 ntBASIC26.32■■□□□ 1.8
NCDNQ9UBB6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
NCDNQ9UBB6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NCDNQ9UBB6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NCDNQ9UBB6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
NCDNQ9UBB6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
NCDNQ9UBB6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
NCDNQ9UBB6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NCDNQ9UBB6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NCDNQ9UBB6 AL033527.3-201ENST00000566366 1196 ntBASIC26.29■■□□□ 1.8
NCDNQ9UBB6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NCDNQ9UBB6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
NCDNQ9UBB6 AC022413.1-201ENST00000624602 984 ntBASIC26.27■■□□□ 1.8
NCDNQ9UBB6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NCDNQ9UBB6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NCDNQ9UBB6 AC008813.1-201ENST00000536597 885 ntBASIC26.26■■□□□ 1.79
NCDNQ9UBB6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.25■■□□□ 1.79
NCDNQ9UBB6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NCDNQ9UBB6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.24■■□□□ 1.79
NCDNQ9UBB6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NCDNQ9UBB6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NCDNQ9UBB6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NCDNQ9UBB6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
NCDNQ9UBB6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NCDNQ9UBB6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NCDNQ9UBB6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
NCDNQ9UBB6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.2■■□□□ 1.78
NCDNQ9UBB6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NCDNQ9UBB6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.19■■□□□ 1.78
NCDNQ9UBB6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NCDNQ9UBB6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NCDNQ9UBB6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCDNQ9UBB6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
NCDNQ9UBB6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCDNQ9UBB6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCDNQ9UBB6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.15■■□□□ 1.78
NCDNQ9UBB6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCDNQ9UBB6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCDNQ9UBB6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
NCDNQ9UBB6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NCDNQ9UBB6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.13■■□□□ 1.77
NCDNQ9UBB6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NCDNQ9UBB6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms