Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.83■□□□□ 0.77
KCNS1Q96KK3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KCNS1Q96KK3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KCNS1Q96KK3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNS1Q96KK3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNS1Q96KK3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNS1Q96KK3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KCNS1Q96KK3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNS1Q96KK3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNS1Q96KK3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNS1Q96KK3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KCNS1Q96KK3 ST7-AS1-201ENST00000456775 1889 ntBASIC19.78■□□□□ 0.76
KCNS1Q96KK3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNS1Q96KK3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNS1Q96KK3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KCNS1Q96KK3 AL031258.1-201ENST00000623562 325 ntBASIC19.77■□□□□ 0.76
KCNS1Q96KK3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KCNS1Q96KK3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
KCNS1Q96KK3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNS1Q96KK3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNS1Q96KK3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KCNS1Q96KK3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCNS1Q96KK3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KCNS1Q96KK3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNS1Q96KK3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KCNS1Q96KK3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KCNS1Q96KK3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNS1Q96KK3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNS1Q96KK3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNS1Q96KK3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNS1Q96KK3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNS1Q96KK3 AP002365.1-201ENST00000603448 772 ntBASIC19.72■□□□□ 0.75
KCNS1Q96KK3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
KCNS1Q96KK3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
KCNS1Q96KK3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.71■□□□□ 0.75
KCNS1Q96KK3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNS1Q96KK3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNS1Q96KK3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.71■□□□□ 0.75
KCNS1Q96KK3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNS1Q96KK3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNS1Q96KK3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNS1Q96KK3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNS1Q96KK3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KCNS1Q96KK3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
KCNS1Q96KK3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNS1Q96KK3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.68■□□□□ 0.74
KCNS1Q96KK3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNS1Q96KK3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KCNS1Q96KK3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.66■□□□□ 0.74
KCNS1Q96KK3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCNS1Q96KK3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCNS1Q96KK3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCNS1Q96KK3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KCNS1Q96KK3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
KCNS1Q96KK3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KCNS1Q96KK3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KCNS1Q96KK3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
KCNS1Q96KK3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
KCNS1Q96KK3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KCNS1Q96KK3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KCNS1Q96KK3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
KCNS1Q96KK3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
KCNS1Q96KK3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KCNS1Q96KK3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KCNS1Q96KK3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KCNS1Q96KK3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KCNS1Q96KK3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KCNS1Q96KK3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KCNS1Q96KK3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KCNS1Q96KK3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KCNS1Q96KK3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KCNS1Q96KK3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNS1Q96KK3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNS1Q96KK3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNS1Q96KK3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNS1Q96KK3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNS1Q96KK3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNS1Q96KK3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNS1Q96KK3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNS1Q96KK3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNS1Q96KK3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KCNS1Q96KK3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNS1Q96KK3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNS1Q96KK3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms