Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFE4Q86UQ8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NFE4Q86UQ8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NFE4Q86UQ8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFE4Q86UQ8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NFE4Q86UQ8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFE4Q86UQ8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.56■□□□□ 0.56
NFE4Q86UQ8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.56■□□□□ 0.56
NFE4Q86UQ8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFE4Q86UQ8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFE4Q86UQ8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFE4Q86UQ8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NFE4Q86UQ8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFE4Q86UQ8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.55■□□□□ 0.56
NFE4Q86UQ8 AL133380.1-201ENST00000506013 324 ntBASIC18.55■□□□□ 0.56
NFE4Q86UQ8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.55■□□□□ 0.56
NFE4Q86UQ8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NFE4Q86UQ8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFE4Q86UQ8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.54■□□□□ 0.56
NFE4Q86UQ8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFE4Q86UQ8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.54■□□□□ 0.56
NFE4Q86UQ8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.54■□□□□ 0.56
NFE4Q86UQ8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.53■□□□□ 0.56
NFE4Q86UQ8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NFE4Q86UQ8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NFE4Q86UQ8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFE4Q86UQ8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NFE4Q86UQ8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NFE4Q86UQ8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.52■□□□□ 0.56
NFE4Q86UQ8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.52■□□□□ 0.56
NFE4Q86UQ8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NFE4Q86UQ8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.51■□□□□ 0.55
NFE4Q86UQ8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NFE4Q86UQ8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NFE4Q86UQ8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFE4Q86UQ8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFE4Q86UQ8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFE4Q86UQ8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NFE4Q86UQ8 SUZ12P1-203ENST00000578195 985 ntBASIC18.48■□□□□ 0.55
NFE4Q86UQ8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFE4Q86UQ8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFE4Q86UQ8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NFE4Q86UQ8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFE4Q86UQ8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFE4Q86UQ8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFE4Q86UQ8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFE4Q86UQ8 AL391121.1-201ENST00000607967 1349 ntBASIC18.46■□□□□ 0.55
NFE4Q86UQ8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
NFE4Q86UQ8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NFE4Q86UQ8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFE4Q86UQ8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFE4Q86UQ8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFE4Q86UQ8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NFE4Q86UQ8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFE4Q86UQ8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NFE4Q86UQ8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFE4Q86UQ8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NFE4Q86UQ8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFE4Q86UQ8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFE4Q86UQ8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NFE4Q86UQ8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFE4Q86UQ8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFE4Q86UQ8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFE4Q86UQ8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFE4Q86UQ8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.42■□□□□ 0.54
NFE4Q86UQ8 CAHM-201ENST00000604200 896 ntBASIC18.42■□□□□ 0.54
NFE4Q86UQ8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFE4Q86UQ8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NFE4Q86UQ8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.41■□□□□ 0.54
NFE4Q86UQ8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NFE4Q86UQ8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.4■□□□□ 0.54
NFE4Q86UQ8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFE4Q86UQ8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFE4Q86UQ8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFE4Q86UQ8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NFE4Q86UQ8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
NFE4Q86UQ8 AP006261.1-201ENST00000584783 668 ntBASIC18.39■□□□□ 0.53
NFE4Q86UQ8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.38■□□□□ 0.53
NFE4Q86UQ8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.38■□□□□ 0.53
NFE4Q86UQ8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NFE4Q86UQ8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NFE4Q86UQ8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.37■□□□□ 0.53
NFE4Q86UQ8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NFE4Q86UQ8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFE4Q86UQ8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFE4Q86UQ8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NFE4Q86UQ8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NFE4Q86UQ8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFE4Q86UQ8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NFE4Q86UQ8 AL135925.1-201ENST00000605920 1701 ntBASIC18.35■□□□□ 0.53
NFE4Q86UQ8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NFE4Q86UQ8 AL121749.1-202ENST00000609313 2153 ntBASIC18.34■□□□□ 0.53
NFE4Q86UQ8 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms