Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
NFE4Q86UQ8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
NFE4Q86UQ8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.28■■□□□ 1.32
NFE4Q86UQ8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
NFE4Q86UQ8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
NFE4Q86UQ8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NFE4Q86UQ8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NFE4Q86UQ8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NFE4Q86UQ8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.63■■□□□ 1.21
NFE4Q86UQ8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.46■■□□□ 1.19
NFE4Q86UQ8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NFE4Q86UQ8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.37■■□□□ 1.17
NFE4Q86UQ8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.34■■□□□ 1.17
NFE4Q86UQ8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NFE4Q86UQ8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.26■■□□□ 1.15
NFE4Q86UQ8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NFE4Q86UQ8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
NFE4Q86UQ8 AL356512.1-201ENST00000607453 1739 ntBASIC22.21■■□□□ 1.15
NFE4Q86UQ8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NFE4Q86UQ8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
NFE4Q86UQ8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
NFE4Q86UQ8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.03■■□□□ 1.12
NFE4Q86UQ8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
NFE4Q86UQ8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NFE4Q86UQ8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NFE4Q86UQ8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NFE4Q86UQ8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
NFE4Q86UQ8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFE4Q86UQ8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NFE4Q86UQ8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NFE4Q86UQ8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NFE4Q86UQ8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NFE4Q86UQ8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
NFE4Q86UQ8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.45■■□□□ 1.02
NFE4Q86UQ8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NFE4Q86UQ8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.41■■□□□ 1.02
NFE4Q86UQ8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.36■■□□□ 1.01
NFE4Q86UQ8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NFE4Q86UQ8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NFE4Q86UQ8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NFE4Q86UQ8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NFE4Q86UQ8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFE4Q86UQ8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFE4Q86UQ8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFE4Q86UQ8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFE4Q86UQ8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFE4Q86UQ8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFE4Q86UQ8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NFE4Q86UQ8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFE4Q86UQ8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NFE4Q86UQ8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NFE4Q86UQ8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NFE4Q86UQ8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NFE4Q86UQ8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFE4Q86UQ8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFE4Q86UQ8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
NFE4Q86UQ8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.9■□□□□ 0.94
NFE4Q86UQ8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NFE4Q86UQ8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NFE4Q86UQ8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NFE4Q86UQ8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFE4Q86UQ8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFE4Q86UQ8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFE4Q86UQ8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NFE4Q86UQ8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.79■□□□□ 0.92
NFE4Q86UQ8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFE4Q86UQ8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFE4Q86UQ8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFE4Q86UQ8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.77■□□□□ 0.92
NFE4Q86UQ8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NFE4Q86UQ8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NFE4Q86UQ8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
NFE4Q86UQ8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NFE4Q86UQ8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFE4Q86UQ8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFE4Q86UQ8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFE4Q86UQ8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFE4Q86UQ8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFE4Q86UQ8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFE4Q86UQ8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFE4Q86UQ8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFE4Q86UQ8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.58■□□□□ 0.89
NFE4Q86UQ8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.56■□□□□ 0.88
NFE4Q86UQ8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFE4Q86UQ8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NFE4Q86UQ8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.53■□□□□ 0.88
NFE4Q86UQ8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NFE4Q86UQ8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
NFE4Q86UQ8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.49■□□□□ 0.87
NFE4Q86UQ8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.47■□□□□ 0.87
NFE4Q86UQ8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.46■□□□□ 0.87
NFE4Q86UQ8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.46■□□□□ 0.87
NFE4Q86UQ8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NFE4Q86UQ8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NFE4Q86UQ8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.45■□□□□ 0.87
NFE4Q86UQ8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFE4Q86UQ8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFE4Q86UQ8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFE4Q86UQ8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.4■□□□□ 0.86
NFE4Q86UQ8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms