Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.72■■□□□ 1.07
MSGN1A6NI15 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSGN1A6NI15 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.71■■□□□ 1.07
MSGN1A6NI15 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSGN1A6NI15 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSGN1A6NI15 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.7■■□□□ 1.06
MSGN1A6NI15 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.7■■□□□ 1.06
MSGN1A6NI15 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MSGN1A6NI15 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSGN1A6NI15 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSGN1A6NI15 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSGN1A6NI15 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.69■■□□□ 1.06
MSGN1A6NI15 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSGN1A6NI15 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSGN1A6NI15 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MSGN1A6NI15 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSGN1A6NI15 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSGN1A6NI15 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSGN1A6NI15 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.67■■□□□ 1.06
MSGN1A6NI15 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
MSGN1A6NI15 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.66■■□□□ 1.06
MSGN1A6NI15 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MSGN1A6NI15 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
MSGN1A6NI15 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSGN1A6NI15 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MSGN1A6NI15 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.63■■□□□ 1.05
MSGN1A6NI15 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSGN1A6NI15 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.63■■□□□ 1.05
MSGN1A6NI15 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSGN1A6NI15 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSGN1A6NI15 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MSGN1A6NI15 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSGN1A6NI15 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSGN1A6NI15 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSGN1A6NI15 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSGN1A6NI15 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.6■■□□□ 1.05
MSGN1A6NI15 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
MSGN1A6NI15 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
MSGN1A6NI15 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSGN1A6NI15 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSGN1A6NI15 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
MSGN1A6NI15 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MSGN1A6NI15 DRD5P2-201ENST00000421395 2012 ntBASIC21.58■■□□□ 1.04
MSGN1A6NI15 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MSGN1A6NI15 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
MSGN1A6NI15 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
MSGN1A6NI15 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSGN1A6NI15 AL135925.1-201ENST00000605920 1701 ntBASIC21.57■■□□□ 1.04
MSGN1A6NI15 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSGN1A6NI15 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.56■■□□□ 1.04
MSGN1A6NI15 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSGN1A6NI15 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSGN1A6NI15 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSGN1A6NI15 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSGN1A6NI15 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
MSGN1A6NI15 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSGN1A6NI15 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSGN1A6NI15 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MSGN1A6NI15 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.53■■□□□ 1.04
MSGN1A6NI15 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.53■■□□□ 1.04
MSGN1A6NI15 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MSGN1A6NI15 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
MSGN1A6NI15 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MSGN1A6NI15 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSGN1A6NI15 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.51■■□□□ 1.03
MSGN1A6NI15 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSGN1A6NI15 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.5■■□□□ 1.03
MSGN1A6NI15 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MSGN1A6NI15 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.48■■□□□ 1.03
MSGN1A6NI15 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MSGN1A6NI15 AL139393.2-201ENST00000608721 2025 ntBASIC21.48■■□□□ 1.03
MSGN1A6NI15 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MSGN1A6NI15 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MSGN1A6NI15 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
MSGN1A6NI15 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MSGN1A6NI15 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.46■■□□□ 1.03
MSGN1A6NI15 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MSGN1A6NI15 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.46■■□□□ 1.03
MSGN1A6NI15 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
MSGN1A6NI15 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
MSGN1A6NI15 RARRES2P7-201ENST00000567349 469 ntBASIC21.45■■□□□ 1.02
MSGN1A6NI15 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
MSGN1A6NI15 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.44■■□□□ 1.02
MSGN1A6NI15 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSGN1A6NI15 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSGN1A6NI15 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSGN1A6NI15 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MSGN1A6NI15 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MSGN1A6NI15 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
MSGN1A6NI15 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
MSGN1A6NI15 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MSGN1A6NI15 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MSGN1A6NI15 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.42■■□□□ 1.02
MSGN1A6NI15 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
MSGN1A6NI15 AL133380.1-201ENST00000506013 324 ntBASIC21.41■■□□□ 1.02
MSGN1A6NI15 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MSGN1A6NI15 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MSGN1A6NI15 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MSGN1A6NI15 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MSGN1A6NI15 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms