Protein–RNA interactions for Protein: A0A0U1RQF7

LOC100131303, HCG1775037, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100131303A0A0U1RQF7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LOC100131303A0A0U1RQF7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC100131303A0A0U1RQF7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.49■□□□□ 0.55
LOC100131303A0A0U1RQF7 AC010864.1-201ENST00000609407 1511 ntBASIC18.49■□□□□ 0.55
LOC100131303A0A0U1RQF7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC100131303A0A0U1RQF7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC100131303A0A0U1RQF7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.49■□□□□ 0.55
LOC100131303A0A0U1RQF7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LOC100131303A0A0U1RQF7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LOC100131303A0A0U1RQF7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC100131303A0A0U1RQF7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LOC100131303A0A0U1RQF7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.47■□□□□ 0.55
LOC100131303A0A0U1RQF7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LOC100131303A0A0U1RQF7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LOC100131303A0A0U1RQF7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LOC100131303A0A0U1RQF7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LOC100131303A0A0U1RQF7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.46■□□□□ 0.55
LOC100131303A0A0U1RQF7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LOC100131303A0A0U1RQF7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LOC100131303A0A0U1RQF7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LOC100131303A0A0U1RQF7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LOC100131303A0A0U1RQF7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LOC100131303A0A0U1RQF7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.45■□□□□ 0.54
LOC100131303A0A0U1RQF7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LOC100131303A0A0U1RQF7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LOC100131303A0A0U1RQF7 MIR762-201ENST00000390236 83 ntBASIC18.44■□□□□ 0.54
LOC100131303A0A0U1RQF7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LOC100131303A0A0U1RQF7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.44■□□□□ 0.54
LOC100131303A0A0U1RQF7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LOC100131303A0A0U1RQF7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LOC100131303A0A0U1RQF7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LOC100131303A0A0U1RQF7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LOC100131303A0A0U1RQF7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC100131303A0A0U1RQF7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LOC100131303A0A0U1RQF7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.43■□□□□ 0.54
LOC100131303A0A0U1RQF7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LOC100131303A0A0U1RQF7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC100131303A0A0U1RQF7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC100131303A0A0U1RQF7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC100131303A0A0U1RQF7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.42■□□□□ 0.54
LOC100131303A0A0U1RQF7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC100131303A0A0U1RQF7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC100131303A0A0U1RQF7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC100131303A0A0U1RQF7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC100131303A0A0U1RQF7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LOC100131303A0A0U1RQF7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC100131303A0A0U1RQF7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.4■□□□□ 0.54
LOC100131303A0A0U1RQF7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LOC100131303A0A0U1RQF7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC100131303A0A0U1RQF7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LOC100131303A0A0U1RQF7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
LOC100131303A0A0U1RQF7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC100131303A0A0U1RQF7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.39■□□□□ 0.53
LOC100131303A0A0U1RQF7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC100131303A0A0U1RQF7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC100131303A0A0U1RQF7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC100131303A0A0U1RQF7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LOC100131303A0A0U1RQF7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LOC100131303A0A0U1RQF7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LOC100131303A0A0U1RQF7 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.36■□□□□ 0.53
LOC100131303A0A0U1RQF7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LOC100131303A0A0U1RQF7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LOC100131303A0A0U1RQF7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.35■□□□□ 0.53
LOC100131303A0A0U1RQF7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LOC100131303A0A0U1RQF7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LOC100131303A0A0U1RQF7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LOC100131303A0A0U1RQF7 AL139393.2-201ENST00000608721 2025 ntBASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 AC005559.1-201ENST00000589661 871 ntBASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LOC100131303A0A0U1RQF7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LOC100131303A0A0U1RQF7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.33■□□□□ 0.52
LOC100131303A0A0U1RQF7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LOC100131303A0A0U1RQF7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
LOC100131303A0A0U1RQF7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LOC100131303A0A0U1RQF7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LOC100131303A0A0U1RQF7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LOC100131303A0A0U1RQF7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LOC100131303A0A0U1RQF7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.31■□□□□ 0.52
LOC100131303A0A0U1RQF7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.31■□□□□ 0.52
LOC100131303A0A0U1RQF7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LOC100131303A0A0U1RQF7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LOC100131303A0A0U1RQF7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC100131303A0A0U1RQF7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC100131303A0A0U1RQF7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC100131303A0A0U1RQF7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC100131303A0A0U1RQF7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC100131303A0A0U1RQF7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms