Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.11■■□□□ 1.13
TRAV38-1A0A0B4J264 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.11■■□□□ 1.13
TRAV38-1A0A0B4J264 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.1■■□□□ 1.13
TRAV38-1A0A0B4J264 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV38-1A0A0B4J264 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV38-1A0A0B4J264 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV38-1A0A0B4J264 AL135925.1-201ENST00000605920 1701 ntBASIC22.09■■□□□ 1.13
TRAV38-1A0A0B4J264 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV38-1A0A0B4J264 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV38-1A0A0B4J264 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV38-1A0A0B4J264 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.09■■□□□ 1.13
TRAV38-1A0A0B4J264 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRAV38-1A0A0B4J264 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
TRAV38-1A0A0B4J264 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.08■■□□□ 1.12
TRAV38-1A0A0B4J264 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAV38-1A0A0B4J264 AC108673.1-201ENST00000510422 1159 ntBASIC22.07■■□□□ 1.12
TRAV38-1A0A0B4J264 AC010864.1-201ENST00000609407 1511 ntBASIC22.06■■□□□ 1.12
TRAV38-1A0A0B4J264 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
TRAV38-1A0A0B4J264 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV38-1A0A0B4J264 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.06■■□□□ 1.12
TRAV38-1A0A0B4J264 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
TRAV38-1A0A0B4J264 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRAV38-1A0A0B4J264 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
TRAV38-1A0A0B4J264 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TRAV38-1A0A0B4J264 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV38-1A0A0B4J264 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV38-1A0A0B4J264 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.03■■□□□ 1.12
TRAV38-1A0A0B4J264 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRAV38-1A0A0B4J264 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
TRAV38-1A0A0B4J264 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAV38-1A0A0B4J264 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAV38-1A0A0B4J264 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22■■□□□ 1.11
TRAV38-1A0A0B4J264 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRAV38-1A0A0B4J264 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRAV38-1A0A0B4J264 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRAV38-1A0A0B4J264 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22■■□□□ 1.11
TRAV38-1A0A0B4J264 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRAV38-1A0A0B4J264 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TRAV38-1A0A0B4J264 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV38-1A0A0B4J264 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV38-1A0A0B4J264 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV38-1A0A0B4J264 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRAV38-1A0A0B4J264 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.97■■□□□ 1.11
TRAV38-1A0A0B4J264 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRAV38-1A0A0B4J264 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRAV38-1A0A0B4J264 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
TRAV38-1A0A0B4J264 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRAV38-1A0A0B4J264 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAV38-1A0A0B4J264 ST7-AS1-201ENST00000456775 1889 ntBASIC21.96■■□□□ 1.11
TRAV38-1A0A0B4J264 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAV38-1A0A0B4J264 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV38-1A0A0B4J264 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV38-1A0A0B4J264 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.95■■□□□ 1.1
TRAV38-1A0A0B4J264 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV38-1A0A0B4J264 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV38-1A0A0B4J264 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.95■■□□□ 1.1
TRAV38-1A0A0B4J264 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV38-1A0A0B4J264 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV38-1A0A0B4J264 MIR6090-201ENST00000622481 60 ntBASIC21.94■■□□□ 1.1
TRAV38-1A0A0B4J264 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.94■■□□□ 1.1
TRAV38-1A0A0B4J264 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV38-1A0A0B4J264 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV38-1A0A0B4J264 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TRAV38-1A0A0B4J264 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV38-1A0A0B4J264 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV38-1A0A0B4J264 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
TRAV38-1A0A0B4J264 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TRAV38-1A0A0B4J264 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.9■■□□□ 1.1
TRAV38-1A0A0B4J264 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV38-1A0A0B4J264 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRAV38-1A0A0B4J264 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TRAV38-1A0A0B4J264 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRAV38-1A0A0B4J264 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV38-1A0A0B4J264 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.88■■□□□ 1.09
TRAV38-1A0A0B4J264 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV38-1A0A0B4J264 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV38-1A0A0B4J264 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.88■■□□□ 1.09
TRAV38-1A0A0B4J264 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV38-1A0A0B4J264 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.87■■□□□ 1.09
TRAV38-1A0A0B4J264 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV38-1A0A0B4J264 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV38-1A0A0B4J264 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV38-1A0A0B4J264 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV38-1A0A0B4J264 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.86■■□□□ 1.09
TRAV38-1A0A0B4J264 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV38-1A0A0B4J264 DUX4L29-201ENST00000425409 679 ntBASIC21.85■■□□□ 1.09
TRAV38-1A0A0B4J264 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV38-1A0A0B4J264 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TRAV38-1A0A0B4J264 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRAV38-1A0A0B4J264 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 ABCB10P1-201ENST00000614297 2181 ntBASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.83■■□□□ 1.09
TRAV38-1A0A0B4J264 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
TRAV38-1A0A0B4J264 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV38-1A0A0B4J264 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms