Protein–RNA interactions for Protein: A0A075B6S6

IGKV2D-30, Immunoglobulin kappa variable 2D-30, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-30A0A075B6S6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGKV2D-30A0A075B6S6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.34□□□□□ -0.11
IGKV2D-30A0A075B6S6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
IGKV2D-30A0A075B6S6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGKV2D-30A0A075B6S6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC14.33□□□□□ -0.12
IGKV2D-30A0A075B6S6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGKV2D-30A0A075B6S6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.32□□□□□ -0.12
IGKV2D-30A0A075B6S6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGKV2D-30A0A075B6S6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGKV2D-30A0A075B6S6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IGKV2D-30A0A075B6S6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC14.3□□□□□ -0.12
IGKV2D-30A0A075B6S6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGKV2D-30A0A075B6S6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGKV2D-30A0A075B6S6 ST7-AS1-201ENST00000456775 1889 ntBASIC14.29□□□□□ -0.12
IGKV2D-30A0A075B6S6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
IGKV2D-30A0A075B6S6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGKV2D-30A0A075B6S6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGKV2D-30A0A075B6S6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IGKV2D-30A0A075B6S6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGKV2D-30A0A075B6S6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGKV2D-30A0A075B6S6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGKV2D-30A0A075B6S6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IGKV2D-30A0A075B6S6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
IGKV2D-30A0A075B6S6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGKV2D-30A0A075B6S6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
IGKV2D-30A0A075B6S6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGKV2D-30A0A075B6S6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGKV2D-30A0A075B6S6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV2D-30A0A075B6S6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV2D-30A0A075B6S6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV2D-30A0A075B6S6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.26□□□□□ -0.13
IGKV2D-30A0A075B6S6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.26□□□□□ -0.13
IGKV2D-30A0A075B6S6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV2D-30A0A075B6S6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV2D-30A0A075B6S6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV2D-30A0A075B6S6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC14.25□□□□□ -0.13
IGKV2D-30A0A075B6S6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
IGKV2D-30A0A075B6S6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV2D-30A0A075B6S6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV2D-30A0A075B6S6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV2D-30A0A075B6S6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV2D-30A0A075B6S6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGKV2D-30A0A075B6S6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV2D-30A0A075B6S6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC14.24□□□□□ -0.13
IGKV2D-30A0A075B6S6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGKV2D-30A0A075B6S6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC14.23□□□□□ -0.13
IGKV2D-30A0A075B6S6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2D-30A0A075B6S6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IGKV2D-30A0A075B6S6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
IGKV2D-30A0A075B6S6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2D-30A0A075B6S6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2D-30A0A075B6S6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2D-30A0A075B6S6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2D-30A0A075B6S6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2D-30A0A075B6S6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2D-30A0A075B6S6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2D-30A0A075B6S6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGKV2D-30A0A075B6S6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2D-30A0A075B6S6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2D-30A0A075B6S6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.2□□□□□ -0.14
IGKV2D-30A0A075B6S6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2D-30A0A075B6S6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2D-30A0A075B6S6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2D-30A0A075B6S6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2D-30A0A075B6S6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2D-30A0A075B6S6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2D-30A0A075B6S6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2D-30A0A075B6S6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2D-30A0A075B6S6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2D-30A0A075B6S6 AC142086.6-201ENST00000621154 1765 ntBASIC14.17□□□□□ -0.14
IGKV2D-30A0A075B6S6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2D-30A0A075B6S6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms